LSM7, chr19:2321516-2328619 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs57401454 chr19:2350294 LSM7 [+21675bp] C - 10 T vs. C 0.158 (T) - >1 (-) 31 (-) >0.05
rs10402284 chr19:2353148 LSM7 [+24529bp] C - 10 T vs. C 0.158 (C) - <1 (-) 32 (-) >0.05
rs56302330 chr19:2356013 LSM7 [+27394bp] C - 10 A vs. G 0.158 (A) - >1 (-) 33 (-) >0.05
rs73919641 chr19:2377014 TMPRSS9 [-12755bp] C - 11 A vs. G - - <1 (-) 1 (-) >0.05
rs112717323 chr19:2373643 TMPRSS9 [-16126bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs146783769 chr19:2357585 LSM7 [+28966bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs55662626 chr19:2280885 C19orf35 C - 8 A vs. G 0.067 (A) 0.225 (A) >1 (-) 5 (-) >0.05
rs77855457 chr19:2354911 LSM7 [+26292bp] C - 10 A vs. G 0.158 (A) - >1 (-) 30 (-) >0.05
rs60107832 chr19:2339773 LSM7 [+11154bp] C - 10 A vs. G 0.15 (A) - >1 (-) 31 (-) >0.05
rs56260718 chr19:2344474 LSM7 [+15855bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs6510657 chr19:2300886 LINGO3 C - 5 T vs. C 0.075 (T) 0.2 (T) >1 (-) 56 (-) >0.05
rs74767226 chr19:2354894 LSM7 [+26275bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs12975217 chr19:2325297 LSM7 C - 11 T vs. C 0.033 (T) 0.017 (T) >1 (-) 22 (-) >0.05
rs116249467 chr19:2339856 LSM7 [+11237bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs143746700 chr19:2339398 LSM7 [+10779bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs145683473 chr19:2354147 LSM7 [+25528bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs56233360 chr19:2309069 LINGO3 [+913bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs145761014 chr19:2354860 LSM7 [+26241bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs113628562 chr19:2356210 LSM7 [+27591bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs77470269 chr19:2339661 LSM7 [+11042bp] C - 10 T vs. C 0.158 (T) - >1 (-) 30 (-) >0.05
rs73916993 chr19:2341405 LSM7 [+12786bp] C - 10 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs117275725 chr19:2315607 LSM7 [-5909bp] C - 5 T vs. G 0.033 (T) - >1 (-) 46 (-) >0.05
rs28606515 chr19:2346389 LSM7 [+17770bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs73919640 chr19:2376976 TMPRSS9 [-12793bp] C - 11 A vs. G - 0.042 (A) >1 (-) 2 (-) >0.05
rs60938029 chr19:2339658 LSM7 [+11039bp] C - 10 T vs. C 0.158 (T) - >1 (-) 29 (-) >0.05
rs141322132 chr19:2326623 LSM7 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs74512060 chr19:2373610 TMPRSS9 [-16159bp] C - 10 A vs. G - - <1 (-) 7 (-) >0.05
rs73919622 chr19:2375312 TMPRSS9 [-14457bp] C - 11 T vs. G 0.042 (G) 0.025 (G) <1 (-) 3 (-) >0.05
rs73919637 chr19:2376240 TMPRSS9 [-13529bp] C - 11 T vs. C 0.042 (T) - >1 (-) 5 (-) >0.05
rs55738540 chr19:2323117 LSM7 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs111418527 chr19:2350926 LSM7 [+22307bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs55704748 chr19:2344484 LSM7 [+15865bp] C - 11 A vs. G 0.275 (G) 0.033 (G) >1 (-) 10 (-) >0.05
rs77246800 chr19:2361748 TMPRSS9 [-28021bp] C - 10 A vs. G 0.158 (A) - >1 (-) 42 (-) >0.05
rs73919625 chr19:2375787 TMPRSS9 [-13982bp] C - 11 T vs. C 0.042 (T) 0.033 (T) >1 (-) 4 (-) >0.05
rs112545595 chr19:2333058 LSM7 [+4439bp] C - 10 T vs. C - - <1 (-) 34 (-) >0.05
rs73919618 chr19:2374726 TMPRSS9 [-15043bp] C - 11 A vs. G - 0.042 (A) >1 (-) 4 (-) >0.05
rs73919619 chr19:2375160 TMPRSS9 [-14609bp] C - 11 T vs. G 0.042 (T) 0.042 (T) >1 (-) 4 (-) >0.05
rs73919621 chr19:2375163 TMPRSS9 [-14606bp] C - 11 A vs. G 0.042 (A) 0.042 (A) >1 (-) 4 (-) >0.05
rs73919617 chr19:2374095 TMPRSS9 [-15674bp] C - 11 T vs. C 0.042 (T) 0.042 (T) >1 (-) 4 (-) >0.05
rs56309901 chr19:2362046 TMPRSS9 [-27723bp] C - 10 A vs. G 0.167 (G) - <1 (-) 41 (-) >0.05
rs117066743 chr19:2373834 TMPRSS9 [-15935bp] C - 11 A vs. T 0.042 (T) 0.042 (T) <1 (-) 4 (-) >0.05
rs80322024 chr19:2361042 TMPRSS9 [-28727bp] C - 10 T vs. C 0.142 (T) - >1 (-) 38 (-) >0.05
rs55974660 chr19:2362063 TMPRSS9 [-27706bp] C - 10 A vs. G 0.175 (G) - <1 (-) 41 (-) >0.05
rs55873587 chr19:2342806 LSM7 [+14187bp] C - 11 T vs. C 0.283 (T) - <1 (-) 12 (-) >0.05
chr19:2347417 chr19:2347417 LSM7 [+18798bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs140932567 chr19:2375400 TMPRSS9 [-14369bp] C - 11 T vs. C - - <1 (-) 2 (-) >0.05
rs73919623 chr19:2375395 TMPRSS9 [-14374bp] C - 11 T vs. C - - <1 (-) 2 (-) >0.05
rs56091758 chr19:2320452 LSM7 [-1064bp] C - 11 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs12460882 chr19:2278509 C19orf35 C - 11 T vs. C 0.067 (C) 0.275 (C) <1 (-) 0 (-) >0.05
rs78048915 chr19:2278508 C19orf35 C - 11 A vs. G 0.067 (G) 0.275 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]