LSM7, chr19:2321516-2328619 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56058112 chr19:2350204 LSM7 [+21585bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs12460460 chr19:2280450 C19orf35 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs12460315 chr19:2280469 C19orf35 C - 11 A vs. G 0.025 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs12460495 chr19:2280649 C19orf35 C - 11 T vs. C 0.042 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs77833359 chr19:2279695 C19orf35 C - 11 A vs. G - 0.275 (G) <1 (-) 0 (-) >0.05
rs148457017 chr19:2309966 LINGO3 [+1810bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs113116376 chr19:2312386 LINGO3 [+4230bp] C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs2159025 chr19:2318944 LSM7 [-2572bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs1971003 chr19:2318819 LSM7 [-2697bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs1609704 chr19:2318455 LSM7 [-3061bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2385174 chr19:2369931 TMPRSS9 [-19838bp] C - 11 T vs. C 0.45 (C) 0.35 (T) <1 (-) 24 (-) >0.05
rs36064137 chr19:2277915 C19orf35 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs72987455 chr19:2321198 LSM7 [-318bp] C - 12 T vs. C 0.2 (T) 0.225 (T) >1 (-) 44 (-) >0.05
rs12459954 chr19:2274864 C19orf35 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs34658798 chr19:2278391 C19orf35 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs4807222 chr19:2308344 LINGO3 [+188bp] C - 11 T vs. C - 0.217 (T) <1 (-) 49 (-) >0.05
rs72987453 chr19:2321148 LSM7 [-368bp] C - 12 T vs. G 0.208 (T) 0.208 (T) >1 (-) 45 (-) >0.05
rs112697225 chr19:2320575 LSM7 [-941bp] C - 12 T vs. C 0.208 (T) 0.2 (T) >1 (-) 44 (-) >0.05
chr19:2375506 chr19:2375506 TMPRSS9 [-14263bp] C - 11 A vs. G - - >1 (-) 18 (-) >0.05
rs34268982 chr19:2278402 C19orf35 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs141257211 chr19:2356158 LSM7 [+27539bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs72987496 chr19:2366907 TMPRSS9 [-22862bp] C - 3 T vs. C 0.033 (T) - <1 (-) 14 (-) >0.05
rs112381299 chr19:2320557 LSM7 [-959bp] C - 12 A vs. C - - >1 (-) 45 (-) >0.05
rs12459955 chr19:2274881 C19orf35 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
chr19:2375500 chr19:2375500 TMPRSS9 [-14269bp] C - 11 T vs. G - - >1 (-) 17 (-) >0.05
rs116872179 chr19:2301128 LINGO3 C - 11 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs4807219 chr19:2275471 C19orf35 C - 11 T vs. C 0.075 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs142385931 chr19:2373122 TMPRSS9 [-16647bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs12985247 chr19:2274359 C19orf35 [-272bp] C - 11 T vs. C 0.083 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs11084931 chr19:2319153 LSM7 [-2363bp] C - 12 A vs. C 0.2 (C) 0.233 (C) <1 (-) 41 (-) >0.05
rs4807223 chr19:2313800 LINGO3 [+5644bp] C - 12 A vs. G 0.117 (A) 0.233 (A) <1 (-) 12 (-) >0.05
rs8110136 chr19:2311086 LINGO3 [+2930bp] C - 9 T vs. G - 0.208 (T) <1 (-) 49 (-) >0.05
rs77028998 chr19:2321939 LSM7 C - 11 A vs. G 0.042 (A) 0.217 (A) <1 (-) 47 (-) >0.05
rs12983632 chr19:2272511 OAZ1 C - 11 T vs. C 0.083 (T) 0.475 (C) >1 (-) 0 (-) >0.05
rs114791489 chr19:2375445 TMPRSS9 [-14324bp] C - 4 T vs. C - - >1 (-) 36 (-) >0.05
rs113581583 chr19:2342955 LSM7 [+14336bp] C - 8 T vs. C 0.025 (T) - <1 (-) 13 (-) >0.05
rs139359677 chr19:2326143 LSM7 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs115504014 chr19:2282022 C19orf35 C - 3 A vs. G 0.033 (A) 0.042 (A) >1 (-) 55 (-) >0.05
rs150276774 chr19:2311144 LINGO3 [+2988bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs11880345 chr19:2341059 LSM7 [+12440bp] C - 11 A vs. G 0.333 (G) 0.483 (G) >1 (-) 22 (-) >0.05
rs16991095 chr19:2310756 LINGO3 [+2600bp] C - 9 T vs. G 0.067 (T) 0.225 (T) >1 (-) 39 (-) >0.05
rs2108525 chr19:2314153 LINGO3 [+5997bp] C - 12 T vs. C - - >1 (-) 18 (-) >0.05
rs79961092 chr19:2309132 LINGO3 [+976bp] C - 8 T vs. C 0.067 (T) 0.233 (T) <1 (-) 58 (-) >0.05
rs79255564 chr19:2310023 LINGO3 [+1867bp] C - 8 A vs. G 0.067 (G) 0.233 (G) >1 (-) 58 (-) >0.05
rs79008834 chr19:2309675 LINGO3 [+1519bp] C - 8 A vs. C 0.067 (A) 0.233 (A) <1 (-) 58 (-) >0.05
rs73518414 chr19:2278755 C19orf35 C - 11 T vs. C 0.1 (T) 0.483 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]