MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113856644 chr17:43932277 SPPL2C [+7839bp] C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62056761 chr17:43969686 MAPT [-2062bp] C - 12 A vs. T 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62055555 chr17:43966282 MAPT [-5466bp] C - 12 T vs. G 0.217 (T) 0.133 (A) <1 (-) 0 (-) <5.00e-08
rs55960528 chr17:43968994 MAPT [-2754bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs885639 chr17:43928614 SPPL2C [+4176bp] C - 12 T vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs17650597 chr17:44030195 MAPT C - 12 A vs. T 0.208 (T) - >1 (-) 0 (-) <5.00e-08
rs55895732 chr17:43968937 MAPT [-2811bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs55943606 chr17:43968874 MAPT [-2874bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs62062288 chr17:44096553 MAPT C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62062289 chr17:44097235 MAPT C - 12 C vs. G - - <1 (-) 0 (-) <5.00e-08
rs10445367 chr17:43932798 SPPL2C [+8360bp] C - 12 T vs. G 0.142 (T) - <1 (-) 0 (-) <5.00e-08
rs56323304 chr17:43932129 SPPL2C [+7691bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs56288604 chr17:43931380 SPPL2C [+6942bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs17690987 chr17:43931626 SPPL2C [+7188bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62056774 chr17:43969901 MAPT [-1847bp] C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62062786 chr17:44024660 MAPT C - 12 C vs. G 0.208 (C) - <1 (-) 0 (-) <5.00e-08
rs2873269 chr17:43931122 SPPL2C [+6684bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs62061731 chr17:44017666 MAPT C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs56146262 chr17:43931907 SPPL2C [+7469bp] C - 12 A vs. C - - <1 (-) 0 (-) <5.00e-08
rs62054820 chr17:43926755 SPPL2C [+2317bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs56385754 chr17:43927255 SPPL2C [+2817bp] C - 12 T vs. G 0.225 (T) - <1 (-) 0 (-) <5.00e-08
rs17573907 chr17:44099082 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62062290 chr17:44099129 MAPT C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62054822 chr17:43927708 SPPL2C [+3270bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs17770337 chr17:43969779 MAPT [-1969bp] C - 12 T vs. G 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs56113217 chr17:43926948 SPPL2C [+2510bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055544 chr17:43964539 MAPT [-7209bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs17691556 chr17:43969168 MAPT [-2580bp] C - 12 A vs. T 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55978005 chr17:44031540 MAPT C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs17652502 chr17:44094471 MAPT C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs62062282 chr17:44094374 MAPT C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62062296 chr17:44100916 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56026128 chr17:43931244 SPPL2C [+6806bp] C - 12 C vs. G 0.2 (C) - <1 (-) 0 (-) <5.00e-08
rs56329743 chr17:43931245 SPPL2C [+6807bp] C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs62062295 chr17:44100906 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs12150242 chr17:44015816 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062806 chr17:44031420 MAPT C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs11575895 chr17:43971785 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062805 chr17:44030773 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062792 chr17:44025347 MAPT C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62055548 chr17:43964899 MAPT [-6849bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs35163442 chr17:44023842 MAPT C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs55944735 chr17:43958172 MAPT [-13576bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs77747656 chr17:44099827 MAPT C - 12 C vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs113327263 chr17:43965063 MAPT [-6685bp] C - 12 T vs. C 0.233 (C) - >1 (-) 0 (-) <5.00e-08
rs17770343 chr17:43970154 MAPT [-1594bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs74457229 chr17:43972581 MAPT C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs4627402 chr17:43932741 SPPL2C [+8303bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62055549 chr17:43965595 MAPT [-6153bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs62061727 chr17:44017124 MAPT C - 12 T vs. G 0.225 (T) - <1 (-) 0 (-) <5.00e-08

Association studies for this region [+]