MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2158257 chr17:44104343 MAPT C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17574228 chr17:44104509 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs75530705 chr17:44154048 KANSL1 C - 11 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62055496 chr17:43953307 MAPT [-18441bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62054835 chr17:43934672 SPPL2C [+10234bp] C - 12 A vs. C 0.183 (C) - >1 (-) 0 (-) <5.00e-08
rs10445369 chr17:43934776 SPPL2C [+10338bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs62063687 chr17:44132592 KANSL1 C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs56036719 chr17:43943974 SPPL2C [+19536bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs75010486 chr17:44103825 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs16940806 chr17:44103826 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17691449 chr17:43964283 MAPT [-7465bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs10445336 chr17:43934948 SPPL2C [+10510bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062772 chr17:44020314 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56180212 chr17:43960911 MAPT [-10837bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs4327091 chr17:44021717 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs111327992 chr17:44126691 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62063673 chr17:44125484 KANSL1 C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62063670 chr17:44123248 KANSL1 C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs2019816 chr17:43959661 MAPT [-12087bp] C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62062771 chr17:44020282 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs79180862 chr17:44131798 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs2188888 chr17:43953695 MAPT [-18053bp] C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62062770 chr17:44019680 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs41399444 chr17:44121469 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs35833914 chr17:44110541 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs112915466 chr17:43958744 MAPT [-13004bp] C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62055525 chr17:43958736 MAPT [-13012bp] C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs62062781 chr17:44022632 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62063675 chr17:44126575 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs36076725 chr17:44110532 KANSL1 C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55886302 chr17:43936011 SPPL2C [+11573bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs56365901 chr17:43960323 MAPT [-11425bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62062782 chr17:44023087 MAPT C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs62055538 chr17:43960997 MAPT [-10751bp] C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs242561 chr17:44026548 MAPT C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs56249780 chr17:43957328 MAPT [-14420bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs56101773 chr17:43957269 MAPT [-14479bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs77009866 chr17:44110888 KANSL1 C - 12 A vs. T 0.208 (T) - >1 (-) 0 (-) <5.00e-08
rs7210219 chr17:44018519 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs4608377 chr17:44113359 KANSL1 C - 12 T vs. C 0.2 (C) - >1 (-) 0 (-) <5.00e-08
rs62062776 chr17:44022043 MAPT C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62055515 chr17:43956370 MAPT [-15378bp] C - 12 T vs. G - - <1 (-) 0 (-) <5.00e-08
rs12150090 chr17:44115886 KANSL1 C - 12 T vs. C 0.192 (T) - <1 (-) 0 (-) <5.00e-08
rs7350928 chr17:44108100 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs17574361 chr17:44108202 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs55937610 chr17:43960283 MAPT [-11465bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs916793 chr17:43954686 MAPT [-17062bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62063680 chr17:44131559 KANSL1 C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs79649865 chr17:44130587 KANSL1 C - 12 T vs. G - - >1 (-) 0 (-) <5.00e-08
rs112074397 chr17:44131022 KANSL1 C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]