MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62054843 chr17:43937184 SPPL2C [+12746bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs41382552 chr17:44118999 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs753235 chr17:43946223 SPPL2C [+21785bp] C - 12 A vs. G 0.225 (A) - <1 (-) 0 (-) <5.00e-08
rs79412431 chr17:43940021 SPPL2C [+15583bp] C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs74944644 chr17:43940020 SPPL2C [+15582bp] C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs34416056 chr17:43951220 MAPT [-20528bp] C - 12 T vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs17575683 chr17:44139662 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs72074014 chr17:43949008 MAPT [-22740bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs55967721 chr17:43948977 MAPT [-22771bp] C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs55673092 chr17:43938882 SPPL2C [+14444bp] C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs56136075 chr17:43936298 SPPL2C [+11860bp] C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs77105679 chr17:44122896 KANSL1 C - 12 A vs. G 0.2 (A) - <1 (-) 0 (-) <5.00e-08
rs7221167 chr17:43933307 SPPL2C [+8869bp] All: C 103,235 14 C vs. T 0.475 (C) 0.167 (C) 0.83 (0.80-0.86) 44 (0-70) 1.08e-23
rs79889833 chr17:43937633 SPPL2C [+13195bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs12185225 chr17:44113491 KANSL1 C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62060760 chr17:44132887 KANSL1 C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62063669 chr17:44122626 KANSL1 C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs77625338 chr17:43937671 SPPL2C [+13233bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs55719714 chr17:43939638 SPPL2C [+15200bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs242559 chr17:44025888 MAPT C - 12 A vs. C 0.225 (C) 0.05 (C) >1 (-) 0 (-) <5.00e-08
rs55888391 chr17:43938107 SPPL2C [+13669bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62060763 chr17:44133403 KANSL1 C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs56026524 chr17:43939389 SPPL2C [+14951bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62060762 chr17:44133396 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs56249080 chr17:43939432 SPPL2C [+14994bp] C - 12 T vs. G 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs56327054 chr17:43943957 SPPL2C [+19519bp] C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs12150223 chr17:43944204 SPPL2C [+19766bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs2316952 chr17:44139190 KANSL1 C - 12 C vs. G - - <1 (-) 0 (-) <5.00e-08
rs62060764 chr17:44133633 KANSL1 C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62060761 chr17:44133162 KANSL1 C - 12 A vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs112197756 chr17:44154105 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs12150558 chr17:44151156 KANSL1 C - 12 T vs. C 0.208 (C) - >1 (-) 0 (-) <5.00e-08
rs62060769 chr17:44135026 KANSL1 C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs78238042 chr17:43948159 MAPT [-23589bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17575437 chr17:44133031 KANSL1 C - 12 A vs. T 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17653889 chr17:44133070 KANSL1 C - 12 A vs. T 0.217 (T) - >1 (-) 0 (-) <5.00e-08
rs17653906 chr17:44133142 KANSL1 C - 12 A vs. G 0.208 (A) - <1 (-) 0 (-) <5.00e-08
rs62060842 chr17:44153607 KANSL1 C - 12 A vs. T - - <1 (-) 0 (-) <5.00e-08
rs55646970 chr17:43938796 SPPL2C [+14358bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62054846 chr17:43938634 SPPL2C [+14196bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs1029463 chr17:44150161 KANSL1 C - 12 T vs. G 0.192 (G) - >1 (-) 0 (-) <5.00e-08
rs62054857 chr17:43939936 SPPL2C [+15498bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs974294 chr17:44150163 KANSL1 C - 12 T vs. G 0.183 (G) - >1 (-) 0 (-) <5.00e-08
rs62055489 chr17:43950441 MAPT [-21307bp] C - 12 A vs. C - - <1 (-) 0 (-) <5.00e-08
rs12150625 chr17:44149448 KANSL1 C - 12 C vs. G 0.208 (G) - >1 (-) 0 (-) <5.00e-08
rs62060765 chr17:44133648 KANSL1 C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62060834 chr17:44151697 KANSL1 C - 12 A vs. T 0.208 (T) - >1 (-) 0 (-) <5.00e-08
rs17575507 chr17:44134095 KANSL1 C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62055478 chr17:43945938 SPPL2C [+21500bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs2316771 chr17:43945931 SPPL2C [+21493bp] C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08

Association studies for this region [+]