MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6503455 chr17:44140748 KANSL1 C - 12 T vs. C 0.375 (T) 0.117 (T) >1 (-) 0 (-) <1.00e-04
rs12051901 chr17:44074586 MAPT All: C 103,235 14 A vs. G 0.258 (A) 0.142 (A) 1.08 (1.05-1.12) 22 (0-59) 1.24e-05
rs2435205 chr17:44018764 MAPT C - 12 A vs. G 0.375 (G) 0.267 (G) <1 (-) 44 (-) <1.00e-04
rs62063662 chr17:44119840 KANSL1 C - 12 T vs. C 0.375 (C) 0.117 (C) <1 (-) 0 (-) <1.00e-04
rs3785883 chr17:44054433 MAPT All: C 103,235 14 A vs. G 0.192 (A) 0.175 (A) 1.09 (1.05-1.14) 19 (0-57) 1.41e-05
rs10514899 chr17:44119987 KANSL1 C - 12 C vs. G 0.375 (G) 0.1 (G) <1 (-) 0 (-) <1.00e-04
rs7213077 chr17:44119051 KANSL1 C - 12 T vs. C 0.375 (C) 0.117 (C) <1 (-) 0 (-) <1.00e-04
rs7220988 chr17:44109474 KANSL1 C - 12 A vs. G 0.375 (A) 0.092 (A) >1 (-) 0 (-) <1.00e-04
rs8079215 chr17:44064851 MAPT All: C 103,235 14 C vs. T 0.258 (C) 0.167 (C) 1.08 (1.04-1.12) 19 (0-57) 1.69e-05
rs2435211 chr17:44063244 MAPT All: C 103,235 14 T vs. C 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.05e-05
rs2435209 chr17:44061893 MAPT All: C 103,235 14 T vs. G 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.21e-05
rs2435210 chr17:44061894 MAPT All: C 103,235 14 T vs. C 0.383 (T) 0.25 (T) 1.08 (1.04-1.11) 0 (0-9) 2.24e-05
rs7209922 chr17:44059408 MAPT All: C 103,235 14 G vs. A 0.25 (G) - 1.08 (1.04-1.12) 24 (0-60) 2.87e-05
rs2316770 chr17:43934256 SPPL2C [+9818bp] All: C 103,235 14 A vs. G 0.442 (A) 0.175 (A) 1.08 (1.04-1.11) 0 (0-49) 3.71e-05
rs62063286 chr17:44041987 MAPT All: C 103,235 14 T vs. C - - 0.92 (0.88-0.96) 17 (0-55) 6.04e-05
rs62063287 chr17:44041992 MAPT All: C 103,235 14 G vs. T - - 0.92 (0.88-0.96) 17 (0-55) 6.09e-05
rs242928 chr17:43943051 SPPL2C [+18613bp] All: C 103,235 14 A vs. G 0.45 (A) 0.208 (A) 1.07 (1.03-1.10) 0 (0-50) 9.52e-05
rs11869096 chr17:43945100 SPPL2C [+20662bp] All: C 103,235 14 A vs. G 0.45 (A) 0.217 (A) 1.07 (1.03-1.10) 0 (0-51) 1.12e-04
rs17690883 chr17:43928866 SPPL2C [+4428bp] All: C 103,235 14 T vs. C 0.142 (T) 0.042 (T) 1.10 (1.05-1.15) 0 (0-46) 1.33e-04
rs17651507 chr17:44059010 MAPT C - 12 A vs. T 0.258 (T) 0.167 (T) <1 (-) 29 (-) <0.05
rs6503453 chr17:44062603 MAPT C - 12 A vs. G - - <1 (-) 12 (-) <0.05
rs2471739 chr17:44080354 MAPT C - 12 T vs. C 0.142 (C) 0.2 (T) <1 (-) 0 (-) <0.05
rs8079387 chr17:43926777 SPPL2C [+2339bp] C - 12 A vs. T 0.258 (T) 0.208 (T) <1 (-) 5 (-) <0.05
rs41543512 chr17:44090778 MAPT C - 12 A vs. T 0.158 (A) 0.375 (A) >1 (-) 0 (-) <0.05
rs60969130 chr17:44090779 MAPT C - 12 A vs. C 0.158 (A) 0.375 (A) >1 (-) 0 (-) <0.05
rs11656151 chr17:44068492 MAPT All: C 103,235 14 G vs. A 0.233 (G) - 1.07 (1.03-1.11) 5 (0-57) 3.83e-04
rs2435203 chr17:44083297 MAPT C - 12 T vs. C 0.117 (C) 0.433 (T) <1 (-) 0 (-) <0.05
rs66499584 chr17:44091780 MAPT C - 12 A vs. G 0.117 (A) 0.375 (A) >1 (-) 0 (-) <0.05
rs13313562 chr17:44056097 MAPT C - 12 C vs. G 0.192 (C) 0.175 (C) >1 (-) 28 (-) <0.05
rs67682367 chr17:44120994 KANSL1 C - 12 A vs. T 0.117 (T) 0.35 (T) <1 (-) 0 (-) <0.05
rs67676322 chr17:44097249 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs58810165 chr17:44151005 KANSL1 C - 12 T vs. C 0.125 (C) 0.35 (C) <1 (-) 0 (-) <0.05
rs16940797 chr17:44099417 MAPT C - 12 T vs. C 0.117 (T) 0.333 (T) >1 (-) 0 (-) <0.05
rs1078997 chr17:44109843 KANSL1 C - 12 A vs. G 0.117 (G) 0.35 (G) <1 (-) 0 (-) <0.05
rs11869074 chr17:44130069 KANSL1 C - 12 T vs. G 0.117 (T) 0.35 (T) >1 (-) 0 (-) <0.05
rs56166297 chr17:44132710 KANSL1 C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs2435212 chr17:44066464 MAPT C - 12 A vs. G 0.167 (A) 0.442 (A) >1 (-) 0 (-) <0.05
rs2435213 chr17:44067847 MAPT C - 12 T vs. G 0.142 (T) 0.417 (G) >1 (-) 0 (-) <0.05
rs35908989 chr17:43994021 MAPT C - 12 T vs. C 0.108 (C) 0.108 (C) <1 (-) 0 (-) <0.05
rs11657504 chr17:44085610 MAPT C - 12 T vs. C 0.117 (T) 0.258 (T) >1 (-) 0 (-) <0.05
rs11079730 chr17:44142132 KANSL1 C - 12 C vs. G 0.108 (C) 0.35 (C) >1 (-) 0 (-) <0.05
rs919463 chr17:44065741 MAPT C - 12 A vs. G 0.117 (A) 0.425 (A) >1 (-) 0 (-) <0.05
rs2435208 chr17:44059497 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs242943 chr17:43924412 SPPL2C C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) <0.05
rs111358211 chr17:43932122 SPPL2C [+7684bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) <0.05
rs2258689 chr17:44067382 MAPT C - 12 T vs. C 0.158 (C) 0.383 (T) <1 (-) 0 (-) <0.05
rs9898786 chr17:43984081 MAPT C - 12 A vs. G 0.083 (A) - >1 (-) 0 (-) <0.05
rs8076152 chr17:43995932 MAPT C - 12 C vs. G 0.392 (G) 0.217 (G) <1 (-) 16 (-) <0.05
rs67896329 chr17:43945088 SPPL2C [+20650bp] C - 11 T vs. C 0.008 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs4792893 chr17:43985723 MAPT C - 12 A vs. G 0.083 (A) - >1 (-) 0 (-) <0.05

Association studies for this region [+]