PAQR6, chr1:156213206-156217881 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3768276 chr1:156198366 PMF1-BGLAP C - 13 A vs. G 0.458 (G) 0.233 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2247937 chr1:156194363 PMF1-BGLAP C - 13 T vs. C - - <1 (-) 2 (-) >0.05
rs933489 chr1:156235120 SMG5 C - 13 T vs. C 0.475 (C) 0.492 (T) <1 (-) 22 (-) >0.05
rs7542798 chr1:156224304 SMG5 C - 13 T vs. C 0.467 (C) 0.492 (T) <1 (-) 30 (-) >0.05
rs2758614 chr1:156236674 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1060604 chr1:156184268 PMF1-BGLAP C - 13 T vs. C 0.392 (C) 0.125 (C) >1 (-) 11 (-) >0.05
rs2853646 chr1:156189626 PMF1-BGLAP C - 13 T vs. C 0.392 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs4998248 chr1:156186604 PMF1-BGLAP C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2248273 chr1:156247907 SMG5 C - 13 T vs. C 0.325 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs759329 chr1:156230936 SMG5 C - 13 A vs. G 0.467 (G) 0.492 (A) <1 (-) 29 (-) >0.05
rs3001791 chr1:156251425 SMG5 C - 13 T vs. G 0.333 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs2842880 chr1:156232358 SMG5 C - 13 T vs. C 0.333 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs10908492 chr1:156224795 SMG5 C - 13 T vs. C 0.467 (T) 0.492 (T) >1 (-) 31 (-) >0.05
rs12072638 chr1:156267480 VHLL [-935bp] C - 13 T vs. G 0.433 (G) 0.408 (G) <1 (-) 21 (-) >0.05
rs139399073 chr1:156224686 SMG5 C - 7 A vs. G - - <1 (-) 21 (-) >0.05
rs12128955 chr1:156243821 SMG5 C - 13 T vs. C 0.475 (T) 0.417 (T) >1 (-) 20 (-) >0.05
rs9943105 chr1:156245245 SMG5 C - 13 T vs. C 0.475 (C) 0.458 (C) <1 (-) 20 (-) >0.05
rs7542045 chr1:156246473 SMG5 C - 13 C vs. G 0.467 (C) 0.475 (C) >1 (-) 20 (-) >0.05
rs2758595 chr1:156187265 PMF1-BGLAP C - 13 A vs. C - - >1 (-) 5 (-) >0.05
rs6701440 chr1:156249505 SMG5 C - 13 A vs. G 0.467 (G) 0.475 (G) <1 (-) 23 (-) >0.05
rs2853644 chr1:156186260 PMF1-BGLAP C - 13 C vs. G - - >1 (-) 7 (-) >0.05
rs2540181 chr1:156177166 SLC25A44 C - 13 A vs. T - - >1 (-) 11 (-) >0.05
rs7534434 chr1:156186615 PMF1-BGLAP C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2736608 chr1:156180349 SLC25A44 C - 13 A vs. T 0.05 (A) 0.1 (A) >1 (-) 7 (-) >0.05
rs2251615 chr1:156202300 PMF1-BGLAP C - 13 T vs. C 0.042 (T) 0.108 (T) >1 (-) 16 (-) >0.05
rs2758606 chr1:156201920 PMF1-BGLAP C - 13 A vs. G 0.042 (A) 0.108 (A) >1 (-) 16 (-) >0.05
rs2736610 chr1:156204714 PMF1-BGLAP C - 13 T vs. C 0.042 (C) 0.1 (C) <1 (-) 16 (-) >0.05
rs2758604 chr1:156199381 PMF1-BGLAP C - 13 C vs. G - - >1 (-) 12 (-) >0.05
rs11264460 chr1:156210422 PMF1-BGLAP C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs2758602 chr1:156198232 PMF1-BGLAP C - 13 T vs. G 0.042 (G) 0.108 (G) <1 (-) 12 (-) >0.05
rs2758596 chr1:156189286 PMF1-BGLAP C - 13 T vs. C 0.05 (T) 0.108 (T) >1 (-) 7 (-) >0.05
rs2256704 chr1:156232131 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2475757 chr1:156186634 PMF1-BGLAP C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs34377219 chr1:156235800 SMG5 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs146794678 chr1:156202375 PMF1-BGLAP C - 7 C vs. G - - <1 (-) 0 (-) >0.05
rs16837272 chr1:156240835 SMG5 C - 13 A vs. C 0.183 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs77234346 chr1:156234008 SMG5 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs74996533 chr1:156240338 SMG5 C - 12 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs2842871 chr1:156201168 PMF1-BGLAP C - 13 A vs. G 0.033 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs7537271 chr1:156260552 TMEM79 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6700751 chr1:156177042 SLC25A44 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2277872 chr1:156246728 SMG5 C - 13 T vs. G 0.167 (G) 0.267 (G) >1 (-) 0 (-) >0.05
rs2241111 chr1:156163718 SLC25A44 [-162bp] C - 13 T vs. C 0.05 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs4661038 chr1:156258503 TMEM79 C - 13 A vs. T 0.167 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs3795728 chr1:156261491 TMEM79 C - 13 C vs. G 0.167 (C) 0.267 (C) <1 (-) 0 (-) >0.05
rs2540182 chr1:156177147 SLC25A44 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs4661037 chr1:156238479 SMG5 C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs140965733 chr1:156258532 TMEM79 C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs2287026 chr1:156230002 SMG5 C - 13 A vs. G 0.167 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs115667544 chr1:156251608 SMG5 C - 8 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs12090516 chr1:156210557 PMF1-BGLAP C - 13 T vs. C 0.167 (T) 0.3 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.