SCARB2, chr4:77079890-77135046 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56277851 chr4:77146872 FAM47E All: C 108,990 15 G vs. A 0.2 (G) 0.15 (A) 1.12 (1.08-1.17) 0 (0-22) 1.24e-09
Meta_image?name=rs56277851

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7657929 chr4:77171957 FAM47E C - 13 T vs. G 0.192 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs894251 chr4:77129840 SCARB2 C - 13 A vs. G 0.075 (A) 0.367 (A) >1 (-) 14 (-) >0.05
rs74617719 chr4:77058983 NUP54 C - 13 T vs. C 0.042 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs145996692 chr4:77169786 FAM47E C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs59786688 chr4:77074576 NUP54 [+4908bp] C - 13 A vs. G 0.133 (G) 0.417 (G) <1 (-) 13 (-) >0.05
rs11938734 chr4:77074586 NUP54 [+4918bp] C - 13 A vs. T 0.117 (T) 0.417 (T) <1 (-) 13 (-) >0.05
rs28718095 chr4:77175112 FAM47E C - 13 A vs. G 0.125 (G) 0.1 (G) <1 (-) 22 (-) >0.05
rs144995498 chr4:77120993 SCARB2 C - 12 T vs. C - - <1 (-) 21 (-) >0.05
rs60289602 chr4:77039973 NUP54 C - 13 T vs. C - - <1 (-) 11 (-) >0.05
rs138275602 chr4:77169303 FAM47E C - 13 A vs. G - - >1 (-) 19 (-) >0.05
rs4859647 chr4:77173299 FAM47E C - 13 T vs. C 0.192 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs116163997 chr4:77175778 FAM47E C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs1441908 chr4:77172595 FAM47E C - 13 T vs. C 0.2 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs28451202 chr4:77130707 SCARB2 C - 11 A vs. C - - >1 (-) 28 (-) >0.05
rs6824953 chr4:77110311 SCARB2 C - 13 C vs. G 0.317 (G) 0.308 (C) <1 (-) 0 (-) >0.05
rs17234715 chr4:77130934 SCARB2 C - 13 T vs. C 0.283 (C) - <1 (-) 5 (-) >0.05
rs11725489 chr4:77075794 SCARB2 [-4096bp] C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs72655520 chr4:77033531 ART3 C - 13 T vs. G 0.042 (T) - <1 (-) 0 (-) >0.05
rs6824981 chr4:77076182 SCARB2 [-3708bp] C - 13 C vs. G - - >1 (-) 5 (-) >0.05
rs4859643 chr4:77164549 FAM47E C - 13 C vs. G 0.325 (C) 0.475 (G) <1 (-) 26 (-) >0.05
rs148816508 chr4:77038757 NUP54 C - 12 T vs. C - - <1 (-) 54 (-) >0.05
rs4859642 chr4:77164468 FAM47E C - 13 A vs. C 0.325 (A) 0.475 (C) <1 (-) 26 (-) >0.05
rs7686854 chr4:77048542 NUP54 C - 13 A vs. G - - >1 (-) 12 (-) >0.05
rs1596118 chr4:77161299 FAM47E C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs114268537 chr4:77048246 NUP54 C - 12 A vs. C 0.008 (C) - >1 (-) 55 (-) >0.05
rs76456533 chr4:77046422 NUP54 C - 13 A vs. G - - <1 (-) 28 (-) >0.05
rs7686870 chr4:77048564 NUP54 C - 13 A vs. G - - >1 (-) 11 (-) >0.05
rs143052491 chr4:77153836 FAM47E C - 12 T vs. C - - <1 (-) 6 (-) >0.05
rs12331583 chr4:77155240 FAM47E C - 13 C vs. G 0.125 (G) 0.108 (G) <1 (-) 15 (-) >0.05
rs6814385 chr4:77155193 FAM47E C - 13 A vs. C 0.125 (A) 0.1 (A) >1 (-) 15 (-) >0.05
rs149919785 chr4:77038185 NUP54 C - 12 T vs. G - - >1 (-) 18 (-) >0.05
rs149094066 chr4:77121203 SCARB2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs139128109 chr4:77165605 FAM47E C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs74467962 chr4:77076576 SCARB2 [-3314bp] C - 5 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs142234430 chr4:77115087 SCARB2 C - 12 T vs. C - - <1 (-) 56 (-) >0.05
rs11724543 chr4:77075784 SCARB2 [-4106bp] C - 13 A vs. G - - <1 (-) 8 (-) >0.05
rs143670970 chr4:77148271 FAM47E C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs12498798 chr4:77168112 FAM47E C - 13 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs894250 chr4:77129908 SCARB2 C - 13 A vs. C 0.408 (A) 0.017 (C) >1 (-) 27 (-) >0.05
rs12499643 chr4:77168321 FAM47E C - 13 A vs. T 0.067 (A) - >1 (-) 0 (-) >0.05
rs4241590 chr4:77068434 NUP54 C - 13 T vs. C 0.333 (T) 0.083 (C) >1 (-) 0 (-) >0.05
rs1348204 chr4:77070290 NUP54 [+622bp] C - 13 A vs. G 0.325 (A) 0.325 (G) >1 (-) 0 (-) >0.05
rs4478213 chr4:77076228 SCARB2 [-3662bp] C - 13 C vs. G 0.1 (G) 0.417 (G) >1 (-) 10 (-) >0.05
rs142588499 chr4:77175335 FAM47E C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs76485048 chr4:77171925 FAM47E C - 13 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs17001619 chr4:77116728 SCARB2 C - 9 A vs. G - - >1 (-) 72 (-) >0.05
rs13126384 chr4:77052530 NUP54 C - 13 T vs. C 0.392 (C) 0.092 (T) >1 (-) 0 (-) >0.05
rs77457533 chr4:77172445 FAM47E C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs12640238 chr4:77132557 SCARB2 C - 13 T vs. G 0.042 (G) 0.358 (G) >1 (-) 15 (-) >0.05
rs17001659 chr4:77131069 SCARB2 C - 13 T vs. C 0.042 (C) 0.35 (C) >1 (-) 15 (-) >0.05

Association studies for this region [+]