SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs789665 chr1:232686743 SIPA1L2 C - 12 C vs. G 0.483 (G) 0.242 (G) >1 (-) 0 (-) <0.05
rs16857291 chr1:232607065 SIPA1L2 C - 9 A vs. G - 0.325 (G) >1 (-) 32 (-) <0.05
rs10797577 chr1:232683040 SIPA1L2 C - 12 A vs. T 0.183 (T) 0.283 (T) <1 (-) 0 (-) <0.05
rs12064604 chr1:232682009 SIPA1L2 C - 12 T vs. C 0.183 (C) 0.283 (C) <1 (-) 0 (-) <0.05
rs7523171 chr1:232596129 SIPA1L2 C - 12 T vs. C 0.117 (C) 0.042 (C) <1 (-) 0 (-) <0.05
rs12116509 chr1:232677774 SIPA1L2 C - 12 A vs. G 0.442 (G) 0.15 (G) >1 (-) 0 (-) <0.05
rs10910554 chr1:232682592 SIPA1L2 C - 12 A vs. T 0.183 (A) 0.283 (A) >1 (-) 0 (-) <0.05
rs789666 chr1:232686897 SIPA1L2 C - 12 A vs. G 0.5 (A) 0.275 (G) >1 (-) 0 (-) <0.05
rs7549623 chr1:232679892 SIPA1L2 C - 12 A vs. T 0.175 (A) 0.25 (A) >1 (-) 0 (-) <0.05
rs1285673 chr1:232712965 SIPA1L2 [+15661bp] C - 13 T vs. C 0.425 (T) 0.183 (T) <1 (-) 0 (-) <0.05
rs12740808 chr1:232730830 SIPA1L2 [+33526bp] C - 13 A vs. G 0.125 (A) - <1 (-) 14 (-) <0.05
rs115887983 chr1:232577797 SIPA1L2 C - 8 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs114584023 chr1:232671179 SIPA1L2 C - 7 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs2781793 chr1:232708588 SIPA1L2 [+11284bp] C - 13 A vs. G - - <1 (-) 22 (-) <0.05
rs34017759 chr1:232542018 SIPA1L2 C - 13 T vs. C 0.058 (T) 0.025 (T) >1 (-) 0 (-) <0.05
rs76866233 chr1:232514772 SIPA1L2 [-18939bp] C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) <0.05
rs2243422 chr1:232706935 SIPA1L2 [+9631bp] C - 13 T vs. C 0.342 (C) 0.4 (T) <1 (-) 26 (-) <0.05
rs644690 chr1:232505285 SIPA1L2 [-28426bp] C - 13 T vs. C 0.308 (T) 0.167 (T) <1 (-) 0 (-) <0.05
rs34045209 chr1:232529496 SIPA1L2 [-4215bp] C - 13 A vs. T 0.058 (A) 0.025 (A) >1 (-) 0 (-) <0.05
rs789648 chr1:232703698 SIPA1L2 [+6394bp] C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <0.05
rs12731562 chr1:232542988 SIPA1L2 C - 13 T vs. C 0.058 (C) 0.017 (C) <1 (-) 0 (-) <0.05
rs6673101 chr1:232708400 SIPA1L2 [+11096bp] C - 13 C vs. G 0.342 (C) - >1 (-) 18 (-) <0.05
rs28402703 chr1:232538834 SIPA1L2 C - 13 T vs. G 0.058 (T) 0.025 (T) >1 (-) 0 (-) <0.05
rs115935260 chr1:232703692 SIPA1L2 [+6388bp] C - 8 A vs. G - - >1 (-) 0 (-) <0.05
rs72755380 chr1:232522781 SIPA1L2 [-10930bp] C - 13 T vs. C 0.042 (C) - <1 (-) 0 (-) <0.05
rs75296900 chr1:232537244 SIPA1L2 C - 13 A vs. C 0.058 (C) 0.025 (C) <1 (-) 0 (-) <0.05
rs2247721 chr1:232700623 SIPA1L2 [+3319bp] C - 13 T vs. C 0.35 (C) 0.408 (T) <1 (-) 26 (-) <0.05
rs72757307 chr1:232537690 SIPA1L2 C - 13 A vs. G 0.042 (G) - <1 (-) 0 (-) <0.05
rs2247872 chr1:232702158 SIPA1L2 [+4854bp] C - 13 A vs. G 0.35 (A) 0.408 (G) >1 (-) 27 (-) <0.05
rs789646 chr1:232703164 SIPA1L2 [+5860bp] C - 13 A vs. C 0.35 (A) 0.392 (C) >1 (-) 27 (-) <0.05
rs811528 chr1:232678681 SIPA1L2 C - 10 A vs. G 0.05 (A) 0.1 (A) >1 (-) 41 (-) <0.05
rs2253731 chr1:232679933 SIPA1L2 C - 10 C vs. G 0.05 (C) 0.1 (C) >1 (-) 41 (-) <0.05
rs789657 chr1:232698060 SIPA1L2 [+756bp] C - 13 A vs. G 0.333 (G) 0.4 (A) <1 (-) 24 (-) <0.05
rs814216 chr1:232678397 SIPA1L2 C - 10 A vs. G 0.05 (A) 0.092 (A) >1 (-) 40 (-) <0.05
rs6672473 chr1:232642837 SIPA1L2 C - 13 A vs. G 0.233 (A) 0.125 (A) >1 (-) 0 (-) <0.05
rs142773621 chr1:232679128 SIPA1L2 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs789656 chr1:232697775 SIPA1L2 [+471bp] C - 13 A vs. T 0.333 (A) 0.4 (T) >1 (-) 24 (-) <0.05
rs141148302 chr1:232685601 SIPA1L2 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs78469260 chr1:232717767 SIPA1L2 [+20463bp] C - 13 A vs. C 0.025 (C) 0.458 (C) <1 (-) 15 (-) <0.05
rs78185987 chr1:232635073 SIPA1L2 C - 9 T vs. C - 0.333 (T) <1 (-) 0 (-) <0.05
rs76178047 chr1:232504644 SIPA1L2 [-29067bp] C - 13 C vs. G 0.083 (C) - <1 (-) 0 (-) <0.05
rs75834518 chr1:232635155 SIPA1L2 C - 9 A vs. G - 0.308 (A) >1 (-) 0 (-) <0.05
rs79709599 chr1:232710674 SIPA1L2 [+13370bp] C - 12 T vs. C - - <1 (-) 9 (-) <0.05
rs4649387 chr1:232715788 SIPA1L2 [+18484bp] C - 13 A vs. G 0.225 (G) 0.433 (A) <1 (-) 0 (-) <0.05
rs147170800 chr1:232713985 SIPA1L2 [+16681bp] C - 12 C vs. G - - <1 (-) 6 (-) <0.05
rs1285680 chr1:232710931 SIPA1L2 [+13627bp] C - 13 T vs. C 0.333 (C) 0.392 (T) <1 (-) 14 (-) <0.05
rs17780062 chr1:232486016 SIPA1L2 [-47695bp] C - 13 A vs. G 0.092 (G) - >1 (-) 0 (-) <0.05
rs75375730 chr1:232635172 SIPA1L2 C - 9 T vs. C - 0.317 (C) >1 (-) 0 (-) <0.05
rs789643 chr1:232680597 SIPA1L2 C - 10 A vs. G 0.058 (A) 0.1 (A) >1 (-) 39 (-) <0.05
rs789654 chr1:232697081 SIPA1L2 C - 13 T vs. C 0.225 (T) 0.4 (C) >1 (-) 0 (-) <0.05

Association studies for this region [+]