SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2225041 chr1:232607986 SIPA1L2 C - 13 T vs. C 0.217 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs139030356 chr1:232672615 SIPA1L2 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs1359629 chr1:232608018 SIPA1L2 C - 13 A vs. G 0.208 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs68190848 chr1:232521369 SIPA1L2 [-12342bp] C - 13 A vs. G 0.092 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs61210230 chr1:232643090 SIPA1L2 C - 9 C vs. G - 0.075 (C) >1 (-) 0 (-) >0.05
rs605812 chr1:232509586 SIPA1L2 [-24125bp] C - 13 A vs. G 0.217 (A) 0.008 (A) <1 (-) 21 (-) >0.05
rs61729754 chr1:232564288 SIPA1L2 C - 7 T vs. G - - <1 (-) 42 (-) >0.05
rs139817345 chr1:232665518 SIPA1L2 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs60600004 chr1:232640191 SIPA1L2 C - 9 T vs. C - 0.042 (T) >1 (-) 0 (-) >0.05
rs789649 chr1:232703739 SIPA1L2 [+6435bp] C - 13 T vs. C 0.033 (C) 0.442 (T) <1 (-) 36 (-) >0.05
rs2148324 chr1:232707216 SIPA1L2 [+9912bp] C - 13 A vs. C 0.317 (C) 0.042 (C) <1 (-) 28 (-) >0.05
rs79423286 chr1:232707729 SIPA1L2 [+10425bp] C - 11 T vs. G - 0.008 (G) <1 (-) 0 (-) >0.05
rs142383943 chr1:232644604 SIPA1L2 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs74230922 chr1:232644559 SIPA1L2 C - 10 T vs. C - 0.075 (C) <1 (-) 0 (-) >0.05
rs2781794 chr1:232708685 SIPA1L2 [+11381bp] C - 13 A vs. C - - >1 (-) 27 (-) >0.05
rs145845165 chr1:232708173 SIPA1L2 [+10869bp] C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs76908598 chr1:232698467 SIPA1L2 [+1163bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs149317705 chr1:232709181 SIPA1L2 [+11877bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2247873 chr1:232702196 SIPA1L2 [+4892bp] C - 13 T vs. C 0.033 (T) 0.442 (C) >1 (-) 35 (-) >0.05
rs76034824 chr1:232710953 SIPA1L2 [+13649bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs2027101 chr1:232709526 SIPA1L2 [+12222bp] C - 13 A vs. T 0.317 (A) 0.05 (A) >1 (-) 27 (-) >0.05
rs6671306 chr1:232633355 SIPA1L2 C - 13 A vs. G 0.217 (G) 0.183 (A) >1 (-) 0 (-) >0.05
rs10910575 chr1:232745707 SIPA1L2 [+48403bp] C - 13 A vs. G 0.117 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs12073958 chr1:232704208 SIPA1L2 [+6904bp] C - 13 A vs. G 0.317 (A) 0.042 (A) >1 (-) 27 (-) >0.05
rs789659 chr1:232699251 SIPA1L2 [+1947bp] C - 13 A vs. T 0.033 (T) 0.408 (A) <1 (-) 33 (-) >0.05
rs1750640 chr1:232584276 SIPA1L2 C - 13 C vs. G 0.35 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs12081377 chr1:232704481 SIPA1L2 [+7177bp] C - 13 A vs. T 0.317 (A) 0.042 (A) >1 (-) 28 (-) >0.05
rs623563 chr1:232487642 SIPA1L2 [-46069bp] C - 13 A vs. C 0.25 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs12140291 chr1:232606632 SIPA1L2 C - 13 A vs. G 0.217 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs12144724 chr1:232606646 SIPA1L2 C - 13 A vs. G 0.2 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs789653 chr1:232695646 SIPA1L2 C - 13 T vs. C 0.025 (T) 0.408 (C) >1 (-) 34 (-) >0.05
rs10910539 chr1:232616938 SIPA1L2 C - 13 A vs. C 0.217 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs35839585 chr1:232712917 SIPA1L2 [+15613bp] C - 13 T vs. C 0.117 (C) - <1 (-) 43 (-) >0.05
rs12749877 chr1:232701777 SIPA1L2 [+4473bp] C - 13 T vs. C 0.317 (T) 0.05 (T) >1 (-) 27 (-) >0.05
rs12746846 chr1:232611545 SIPA1L2 C - 13 A vs. T 0.217 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs149090852 chr1:232711860 SIPA1L2 [+14556bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs12072371 chr1:232702788 SIPA1L2 [+5484bp] C - 13 A vs. G 0.317 (A) 0.042 (A) >1 (-) 27 (-) >0.05
rs6686543 chr1:232638703 SIPA1L2 C - 13 T vs. C 0.258 (T) 0.125 (C) >1 (-) 11 (-) >0.05
rs72759315 chr1:232582103 SIPA1L2 C - 12 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs12116822 chr1:232607094 SIPA1L2 C - 13 T vs. C 0.208 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs12116796 chr1:232607050 SIPA1L2 C - 13 A vs. T 0.225 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs796877 chr1:232697800 SIPA1L2 [+496bp] C - 13 T vs. C 0.033 (T) 0.375 (C) >1 (-) 36 (-) >0.05
rs720806 chr1:232639262 SIPA1L2 C - 13 A vs. T 0.258 (A) 0.117 (T) >1 (-) 9 (-) >0.05
rs10495325 chr1:232603151 SIPA1L2 C - 9 T vs. G - 0.325 (G) >1 (-) 35 (-) >0.05
rs147276133 chr1:232697843 SIPA1L2 [+539bp] C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs7545794 chr1:232616107 SIPA1L2 C - 13 A vs. C 0.208 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs10495328 chr1:232633312 SIPA1L2 C - 13 T vs. G 0.217 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs138883875 chr1:232697619 SIPA1L2 [+315bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs6676856 chr1:232638674 SIPA1L2 C - 13 A vs. G 0.258 (A) 0.125 (G) >1 (-) 12 (-) >0.05
rs7543410 chr1:232618155 SIPA1L2 C - 13 T vs. G 0.217 (T) 0.133 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]