SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12126290 chr1:232622624 SIPA1L2 C - 13 A vs. G 0.217 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs61154040 chr1:232707837 SIPA1L2 [+10533bp] C - 13 A vs. T 0.192 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs61825384 chr1:232695275 SIPA1L2 C - 13 T vs. C 0.192 (T) - >1 (-) 0 (-) >0.05
rs789358 chr1:232513666 SIPA1L2 [-20045bp] C - 13 T vs. G 0.342 (G) 0.208 (G) <1 (-) 8 (-) >0.05
rs789365 chr1:232501148 SIPA1L2 [-32563bp] C - 13 A vs. T 0.442 (A) 0.192 (A) <1 (-) 16 (-) >0.05
rs71638442 chr1:232735640 SIPA1L2 [+38336bp] C - 13 T vs. C 0.05 (C) - <1 (-) 0 (-) >0.05
rs12737088 chr1:232624050 SIPA1L2 C - 13 C vs. G 0.217 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs880836 chr1:232627536 SIPA1L2 C - 13 A vs. G 0.217 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs880835 chr1:232627719 SIPA1L2 C - 13 T vs. C 0.217 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs116788834 chr1:232671292 SIPA1L2 C - 9 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs76228662 chr1:232733589 SIPA1L2 [+36285bp] C - 9 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs60102288 chr1:232705649 SIPA1L2 [+8345bp] C - 13 A vs. G 0.192 (G) - <1 (-) 0 (-) >0.05
rs77934688 chr1:232503378 SIPA1L2 [-30333bp] C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs115813926 chr1:232734008 SIPA1L2 [+36704bp] C - 13 A vs. G 0.033 (A) 0.292 (A) >1 (-) 4 (-) >0.05
rs3737839 chr1:232629475 SIPA1L2 C - 13 T vs. C 0.217 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs4649380 chr1:232630090 SIPA1L2 C - 13 T vs. C 0.217 (C) 0.133 (C) >1 (-) 0 (-) >0.05
rs12118459 chr1:232624968 SIPA1L2 C - 13 A vs. C 0.208 (C) 0.133 (C) >1 (-) 0 (-) >0.05
rs67026864 chr1:232624969 SIPA1L2 C - 13 C vs. G 0.217 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs79391963 chr1:232603041 SIPA1L2 C - 9 T vs. C - 0.325 (T) <1 (-) 38 (-) >0.05
rs76139782 chr1:232589441 SIPA1L2 C - 13 A vs. G 0.117 (A) - <1 (-) 18 (-) >0.05
rs17805399 chr1:232729620 SIPA1L2 [+32316bp] C - 13 A vs. G 0.217 (A) - <1 (-) 1 (-) >0.05
rs3120764 chr1:232506289 SIPA1L2 [-27422bp] C - 13 T vs. C 0.283 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs4649381 chr1:232630891 SIPA1L2 C - 13 T vs. C 0.217 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs3120763 chr1:232505957 SIPA1L2 [-27754bp] C - 13 T vs. C 0.283 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs150455578 chr1:232495723 SIPA1L2 [-37988bp] C - 8 T vs. C - - >1 (-) 46 (-) >0.05
rs16856856 chr1:232488699 SIPA1L2 [-45012bp] C - 13 A vs. G - 0.442 (G) <1 (-) 0 (-) >0.05
rs10797572 chr1:232602344 SIPA1L2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12021994 chr1:232547302 SIPA1L2 C - 11 T vs. C - 0.317 (T) <1 (-) 0 (-) >0.05
rs79384989 chr1:232741233 SIPA1L2 [+43929bp] C - 12 T vs. G 0.05 (T) - >1 (-) 0 (-) >0.05
rs12403701 chr1:232633903 SIPA1L2 C - 13 C vs. G 0.217 (C) 0.125 (C) <1 (-) 0 (-) >0.05
rs116807456 chr1:232593292 SIPA1L2 C - 11 A vs. G 0.017 (G) - <1 (-) 19 (-) >0.05
rs74658765 chr1:232633419 SIPA1L2 C - 10 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs10495323 chr1:232584114 SIPA1L2 C - 13 T vs. C 0.208 (T) 0.367 (C) <1 (-) 0 (-) >0.05
rs3131810 chr1:232506067 SIPA1L2 [-27644bp] C - 13 A vs. G 0.283 (A) 0.167 (A) >1 (-) 0 (-) >0.05
rs12749460 chr1:232621954 SIPA1L2 C - 13 A vs. G 0.217 (A) - <1 (-) 0 (-) >0.05
rs12753215 chr1:232606377 SIPA1L2 C - 13 A vs. C 0.208 (C) - >1 (-) 0 (-) >0.05
rs880834 chr1:232627782 SIPA1L2 C - 13 T vs. C 0.208 (C) - >1 (-) 0 (-) >0.05
rs16857105 chr1:232578380 SIPA1L2 C - 13 A vs. T 0.208 (A) 0.367 (T) <1 (-) 0 (-) >0.05
rs116287740 chr1:232549794 SIPA1L2 C - 11 A vs. C 0.008 (A) - >1 (-) 0 (-) >0.05
rs592557 chr1:232489950 SIPA1L2 [-43761bp] C - 11 T vs. C 0.4 (T) 0.15 (T) >1 (-) 5 (-) >0.05
rs4649389 chr1:232725391 SIPA1L2 [+28087bp] C - 13 T vs. C 0.017 (T) 0.467 (T) >1 (-) 0 (-) >0.05
rs668959 chr1:232484393 SIPA1L2 [-49318bp] C - 13 A vs. T 0.458 (T) 0.383 (A) >1 (-) 0 (-) >0.05
rs72755391 chr1:232528332 SIPA1L2 [-5379bp] C - 13 A vs. G 0.075 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs12123875 chr1:232630479 SIPA1L2 C - 13 A vs. G 0.217 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs6672664 chr1:232604574 SIPA1L2 C - 13 C vs. G 0.217 (G) - >1 (-) 0 (-) >0.05
rs12128065 chr1:232623119 SIPA1L2 C - 13 T vs. C 0.217 (C) 0.133 (C) >1 (-) 0 (-) >0.05
rs12735257 chr1:232585476 SIPA1L2 C - 13 A vs. G 0.208 (G) - >1 (-) 0 (-) >0.05
rs7533227 chr1:232642297 SIPA1L2 C - 13 T vs. C 0.275 (T) 0.242 (T) >1 (-) 0 (-) >0.05
rs1285674 chr1:232712806 SIPA1L2 [+15502bp] C - 13 A vs. G 0.317 (A) 0.258 (A) >1 (-) 0 (-) >0.05
rs12048076 chr1:232550498 SIPA1L2 C - 9 A vs. G - 0.458 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]