SMAD7, chr18:46446223-46477081 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs59086770 chr18:46517652 SMAD7 [+40571bp] C - 13 A vs. G 0.083 (A) 0.192 (A) <1 (-) 2 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34692620 chr18:46488089 SMAD7 [+11008bp] C - 12 A vs. C - 0.05 (A) >1 (-) 42 (-) >0.05
rs4939835 chr18:46487864 SMAD7 [+10783bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs62103339 chr18:46432273 SMAD7 [-13950bp] C - 12 T vs. C 0.183 (T) - <1 (-) 0 (-) >0.05
rs61174167 chr18:46467295 SMAD7 C - 12 A vs. G 0.108 (A) 0.3 (A) <1 (-) 36 (-) >0.05
rs57633475 chr18:46469650 SMAD7 C - 12 A vs. G 0.083 (G) 0.283 (G) >1 (-) 37 (-) >0.05
rs12962825 chr18:46513913 SMAD7 [+36832bp] C - 13 A vs. G 0.383 (G) 0.3 (G) >1 (-) 4 (-) >0.05
rs115093959 chr18:46437902 SMAD7 [-8321bp] C - 8 A vs. G - - >1 (-) 4 (-) >0.05
rs56349175 chr18:46404281 CTIF [+14693bp] C - 13 A vs. G 0.167 (A) - >1 (-) 5 (-) >0.05
rs4939832 chr18:46465665 SMAD7 C - 12 A vs. G 0.225 (G) 0.333 (G) >1 (-) 10 (-) >0.05
rs28435600 chr18:46494889 SMAD7 [+17808bp] C - 12 A vs. G 0.158 (G) 0.033 (G) >1 (-) 20 (-) >0.05
rs59741680 chr18:46466512 SMAD7 C - 12 T vs. C 0.092 (T) 0.3 (T) <1 (-) 32 (-) >0.05
rs143886628 chr18:46514700 SMAD7 [+37619bp] C - 6 T vs. G - - >1 (-) 0 (-) >0.05
rs8089910 chr18:46510376 SMAD7 [+33295bp] C - 13 C vs. G 0.383 (C) 0.333 (C) <1 (-) 2 (-) >0.05
rs2635509 chr18:46514192 SMAD7 [+37111bp] C - 13 A vs. G 0.433 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs146739221 chr18:46458997 SMAD7 C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs77583364 chr18:46514570 SMAD7 [+37489bp] C - 13 C vs. G 0.058 (C) - >1 (-) 0 (-) >0.05
rs357864 chr18:46517238 SMAD7 [+40157bp] C - 13 T vs. G 0.058 (T) - >1 (-) 0 (-) >0.05
rs357865 chr18:46517334 SMAD7 [+40253bp] C - 13 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs78308288 chr18:46482687 SMAD7 [+5606bp] C - 13 T vs. C 0.183 (T) - <1 (-) 0 (-) >0.05
rs12327398 chr18:46499225 SMAD7 [+22144bp] C - 13 T vs. C 0.208 (T) - <1 (-) 0 (-) >0.05
rs79521338 chr18:46483542 SMAD7 [+6461bp] C - 13 A vs. G 0.183 (A) - <1 (-) 0 (-) >0.05
rs1319951 chr18:46404813 CTIF [+15225bp] C - 13 C vs. G 0.15 (G) - <1 (-) 11 (-) >0.05
rs12960829 chr18:46510305 SMAD7 [+33224bp] C - 13 A vs. G 0.383 (A) 0.333 (A) <1 (-) 2 (-) >0.05
rs3809923 chr18:46447817 SMAD7 C - 6 C vs. G - 0.1 (C) <1 (-) 0 (-) >0.05
rs77243909 chr18:46472142 SMAD7 C - 12 T vs. C 0.042 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs7228847 chr18:46470143 SMAD7 C - 12 T vs. C 0.025 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs62104029 chr18:46510928 SMAD7 [+33847bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs146755665 chr18:46397179 CTIF [+7591bp] C - 10 T vs. C - - <1 (-) 14 (-) >0.05
rs10163884 chr18:46511939 SMAD7 [+34858bp] C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs72919654 chr18:46500528 SMAD7 [+23447bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs116868866 chr18:46397175 CTIF [+7587bp] C - 8 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs28759191 chr18:46510730 SMAD7 [+33649bp] C - 13 A vs. G 0.167 (A) - <1 (-) 0 (-) >0.05
rs59456395 chr18:46408882 CTIF [+19294bp] C - 13 A vs. T 0.075 (T) 0.083 (T) >1 (-) 14 (-) >0.05
rs150707667 chr18:46491789 SMAD7 [+14708bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs62105269 chr18:46458113 SMAD7 C - 12 T vs. C 0.108 (T) - >1 (-) 32 (-) >0.05
rs72917712 chr18:46406232 CTIF [+16644bp] C - 13 A vs. G 0.175 (A) 0.017 (A) >1 (-) 4 (-) >0.05
rs2635515 chr18:46506038 SMAD7 [+28957bp] C - 12 T vs. C - - >1 (-) 24 (-) >0.05
rs4629039 chr18:46485154 SMAD7 [+8073bp] C - 12 A vs. T 0.308 (T) 0.367 (A) <1 (-) 17 (-) >0.05
rs116420695 chr18:46494890 SMAD7 [+17809bp] C - 10 A vs. C - - <1 (-) 13 (-) >0.05
rs10460079 chr18:46498146 SMAD7 [+21065bp] C - 12 A vs. C 0.158 (C) 0.175 (C) >1 (-) 35 (-) >0.05
rs62104031 chr18:46519076 SMAD7 [+41995bp] C - 13 A vs. G 0.158 (A) - <1 (-) 0 (-) >0.05
rs62104030 chr18:46514068 SMAD7 [+36987bp] C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs34296038 chr18:46479306 SMAD7 [+2225bp] C - 12 A vs. G 0.175 (A) - >1 (-) 43 (-) >0.05
rs146874443 chr18:46412767 CTIF [+23179bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs55971313 chr18:46403636 CTIF [+14048bp] C - 13 T vs. G - - <1 (-) 4 (-) >0.05
rs77680155 chr18:46401186 CTIF [+11598bp] C - 13 T vs. G 0.083 (T) 0.15 (T) <1 (-) 12 (-) >0.05
rs147184149 chr18:46484068 SMAD7 [+6987bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs79686774 chr18:46398309 CTIF [+8721bp] C - 13 A vs. G 0.058 (A) 0.117 (A) <1 (-) 16 (-) >0.05
rs357867 chr18:46518154 SMAD7 [+41073bp] C - 13 T vs. C 0.058 (C) - <1 (-) 0 (-) >0.05
rs143461525 chr18:46492864 SMAD7 [+15783bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.