SMAD7, chr18:46446223-46477081 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs59086770 chr18:46517652 SMAD7 [+40571bp] C - 13 A vs. G 0.083 (A) 0.192 (A) <1 (-) 2 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11874705 chr18:46508620 SMAD7 [+31539bp] C - 13 A vs. G 0.167 (G) - >1 (-) 0 (-) >0.05
rs62104028 chr18:46508309 SMAD7 [+31228bp] C - 13 A vs. T 0.175 (A) - <1 (-) 0 (-) >0.05
rs79056023 chr18:46464223 SMAD7 C - 13 A vs. G 0.042 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs28673664 chr18:46433958 SMAD7 [-12265bp] C - 12 T vs. C 0.075 (T) 0.083 (T) <1 (-) 26 (-) >0.05
rs4245230 chr18:46469664 SMAD7 C - 13 A vs. G 0.492 (A) 0.383 (G) <1 (-) 30 (-) >0.05
rs9951367 chr18:46438353 SMAD7 [-7870bp] C - 12 T vs. C 0.067 (C) - <1 (-) 10 (-) >0.05
rs2442007 chr18:46526812 DYM [-43227bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs28475398 chr18:46433938 SMAD7 [-12285bp] C - 12 C vs. G 0.075 (C) 0.075 (C) <1 (-) 22 (-) >0.05
rs4939567 chr18:46451873 SMAD7 C - 13 A vs. G 0.475 (G) 0.35 (G) >1 (-) 15 (-) >0.05
rs2337148 chr18:46493388 SMAD7 [+16307bp] C - 12 T vs. C - - >1 (-) 37 (-) >0.05
rs11874392 chr18:46453156 SMAD7 C - 13 A vs. T 0.475 (A) 0.367 (A) <1 (-) 15 (-) >0.05
rs6507877 chr18:46458950 SMAD7 C - 13 A vs. G 0.367 (A) 0.358 (A) >1 (-) 10 (-) >0.05
rs60789262 chr18:46467107 SMAD7 C - 12 T vs. C 0.05 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs34007497 chr18:46451073 SMAD7 C - 13 C vs. G 0.342 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs11082716 chr18:46401933 CTIF [+12345bp] C - 13 C vs. G 0.242 (G) 0.142 (G) <1 (-) 31 (-) >0.05
rs67080237 chr18:46430537 SMAD7 [-15686bp] C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs9962140 chr18:46438350 SMAD7 [-7873bp] C - 6 T vs. C - - >1 (-) 14 (-) >0.05
rs12606334 chr18:46396496 CTIF [+6908bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1317694 chr18:46401470 CTIF [+11882bp] C - 13 A vs. T 0.242 (T) 0.15 (T) <1 (-) 26 (-) >0.05
rs146331614 chr18:46431090 SMAD7 [-15133bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs9944944 chr18:46445495 SMAD7 [-728bp] C - 12 A vs. G 0.067 (A) 0.133 (A) >1 (-) 23 (-) >0.05
rs16950090 chr18:46442216 SMAD7 [-4007bp] C - 12 T vs. C 0.067 (T) 0.208 (T) <1 (-) 25 (-) >0.05
rs9952412 chr18:46465540 SMAD7 C - 13 A vs. C 0.425 (C) 0.383 (C) <1 (-) 30 (-) >0.05
rs28712353 chr18:46432374 SMAD7 [-13849bp] C - 12 T vs. G 0.075 (T) 0.083 (T) <1 (-) 24 (-) >0.05
rs28660277 chr18:46430219 SMAD7 [-16004bp] C - 13 A vs. G 0.058 (A) 0.083 (A) <1 (-) 10 (-) >0.05
rs58920878 chr18:46449565 SMAD7 C - 13 C vs. G 0.35 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs6507876 chr18:46458921 SMAD7 C - 13 T vs. G 0.092 (G) 0.333 (G) <1 (-) 22 (-) >0.05
rs884013 chr18:46456130 SMAD7 C - 12 T vs. C 0.042 (T) - >1 (-) 1 (-) >0.05
rs16950087 chr18:46442183 SMAD7 [-4040bp] C - 12 T vs. C 0.067 (T) 0.208 (T) <1 (-) 21 (-) >0.05
rs2337149 chr18:46493463 SMAD7 [+16382bp] C - 13 T vs. C - - >1 (-) 31 (-) >0.05
rs9957487 chr18:46441970 SMAD7 [-4253bp] C - 12 C vs. G 0.067 (G) 0.217 (G) >1 (-) 18 (-) >0.05
rs7242007 chr18:46404465 CTIF [+14877bp] C - 13 A vs. G 0.242 (A) 0.142 (A) >1 (-) 30 (-) >0.05
rs6507875 chr18:46448819 SMAD7 C - 13 C vs. G 0.458 (G) 0.258 (C) <1 (-) 25 (-) >0.05
rs60385309 chr18:46457358 SMAD7 C - 13 A vs. G 0.05 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs9964452 chr18:46444366 SMAD7 [-1857bp] C - 12 T vs. C 0.067 (T) 0.125 (T) >1 (-) 28 (-) >0.05
rs2878890 chr18:46456394 SMAD7 C - 3 T vs. C - - <1 (-) 12 (-) >0.05
rs752151 chr18:46443298 SMAD7 [-2925bp] C - 12 A vs. G 0.067 (A) 0.183 (A) <1 (-) 21 (-) >0.05
rs34218943 chr18:46498308 SMAD7 [+21227bp] C - 12 C vs. G - - <1 (-) 17 (-) >0.05
rs9944966 chr18:46445626 SMAD7 [-597bp] C - 12 C vs. G 0.067 (G) 0.133 (G) <1 (-) 22 (-) >0.05
rs59223542 chr18:46457377 SMAD7 C - 12 A vs. C 0.2 (A) 0.275 (A) >1 (-) 0 (-) >0.05
rs72917785 chr18:46459179 SMAD7 C - 13 A vs. C 0.05 (C) 0.125 (C) <1 (-) 0 (-) >0.05
rs16950113 chr18:46446589 SMAD7 C - 12 T vs. C 0.067 (C) 0.142 (C) <1 (-) 22 (-) >0.05
rs143823214 chr18:46509438 SMAD7 [+32357bp] C - 4 A vs. G - - >1 (-) 40 (-) >0.05
rs112286346 chr18:46443160 SMAD7 [-3063bp] C - 12 A vs. G 0.067 (A) 0.208 (A) <1 (-) 21 (-) >0.05
rs2635516 chr18:46506143 SMAD7 [+29062bp] C - 13 A vs. G 0.45 (G) 0.233 (G) >1 (-) 0 (-) >0.05
rs73435413 chr18:46442485 SMAD7 [-3738bp] C - 12 A vs. G 0.067 (G) 0.208 (G) >1 (-) 23 (-) >0.05
rs2878899 chr18:46507757 SMAD7 [+30676bp] C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs143288319 chr18:46421899 SMAD7 [-24324bp] C - 7 T vs. C - - >1 (-) 41 (-) >0.05
rs1319944 chr18:46402638 CTIF [+13050bp] C - 13 C vs. G 0.242 (C) 0.15 (C) >1 (-) 31 (-) >0.05
rs62104025 chr18:46504799 SMAD7 [+27718bp] C - 4 C vs. G - - >1 (-) 5 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.