SPON2, chr4:1160720-1202750 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76717949 chr4:1169612 SPON2 C - 8 A vs. G - 0.042 (A) >1 (-) 48 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs73067706 chr4:1160559 SPON2 [-161bp] C - 13 T vs. C 0.15 (T) - <1 (-) 37 (-) >0.05
rs7685051 chr4:1119749 RNF212 [+12399bp] C - 13 A vs. G - - >1 (-) 38 (-) >0.05
rs10015944 chr4:1150063 SPON2 [-10657bp] C - 13 A vs. G 0.183 (A) - <1 (-) 40 (-) >0.05
rs80343107 chr4:1152336 SPON2 [-8384bp] C - 13 T vs. C 0.108 (T) - <1 (-) 43 (-) >0.05
rs115951390 chr4:1196955 SPON2 C - 8 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs10014245 chr4:1154202 SPON2 [-6518bp] C - 13 A vs. G 0.183 (A) - <1 (-) 41 (-) >0.05
rs13118508 chr4:1129620 RNF212 [+22270bp] C - 13 A vs. G 0.242 (G) 0.267 (G) >1 (-) 10 (-) >0.05
rs7684536 chr4:1112250 RNF212 [+4900bp] C - 13 A vs. G 0.183 (G) - >1 (-) 36 (-) >0.05
rs10029139 chr4:1116701 RNF212 [+9351bp] C - 13 C vs. G 0.175 (G) - >1 (-) 39 (-) >0.05
rs11554784 chr4:1244682 CTBP1 [+941bp] C - 13 A vs. C - - <1 (-) 57 (-) >0.05
rs55679328 chr4:1230483 CTBP1 C - 13 A vs. T - - <1 (-) 12 (-) >0.05
rs900024 chr4:1203548 SPON2 [+798bp] C - 13 T vs. C 0.125 (C) 0.233 (C) >1 (-) 0 (-) >0.05
rs34490749 chr4:1217981 CTBP1 C - 13 A vs. G 0.483 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs1250089 chr4:1214487 CTBP1 C - 13 T vs. C 0.358 (C) 0.4 (C) >1 (-) 0 (-) >0.05
rs900013 chr4:1240450 CTBP1 C - 13 A vs. G 0.125 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs7659624 chr4:1179213 SPON2 C - 12 T vs. C 0.333 (C) 0.292 (C) >1 (-) 19 (-) >0.05
rs9884459 chr4:1179980 SPON2 C - 13 T vs. C - - >1 (-) 10 (-) >0.05
rs1732117 chr4:1217906 CTBP1 C - 13 A vs. G 0.117 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs4974574 chr4:1224811 CTBP1 C - 13 A vs. G 0.467 (G) 0.233 (G) >1 (-) 21 (-) >0.05
rs11247978 chr4:1186494 SPON2 C - 13 C vs. G 0.425 (G) 0.233 (C) >1 (-) 0 (-) >0.05
rs1250099 chr4:1237052 CTBP1 C - 13 A vs. G 0.142 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs3775099 chr4:1232510 CTBP1 C - 13 C vs. G 0.458 (G) 0.225 (G) <1 (-) 13 (-) >0.05
rs112333640 chr4:1141387 SPON2 [-19333bp] C - 13 T vs. C - - >1 (-) 49 (-) >0.05
rs1250126 chr4:1191042 SPON2 C - 13 A vs. G 0.25 (A) 0.233 (A) >1 (-) 32 (-) >0.05
rs76603519 chr4:1170385 SPON2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs11247979 chr4:1207517 CTBP1 C - 13 T vs. C 0.15 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs114070029 chr4:1158689 SPON2 [-2031bp] C - 12 T vs. C 0.042 (T) - >1 (-) 32 (-) >0.05
rs1250108 chr4:1229094 CTBP1 C - 13 A vs. G 0.358 (G) 0.417 (G) >1 (-) 0 (-) >0.05
rs12643212 chr4:1224948 CTBP1 C - 13 A vs. G 0.467 (G) 0.242 (G) >1 (-) 18 (-) >0.05
rs1732115 chr4:1244416 CTBP1 [+675bp] C - 13 A vs. G 0.125 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs1680057 chr4:1220244 CTBP1 C - 13 T vs. C 0.1 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs1680032 chr4:1243573 CTBP1 C - 13 T vs. C 0.142 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs3775100 chr4:1225106 CTBP1 C - 13 T vs. C 0.467 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs2004531 chr4:1217056 CTBP1 C - 12 A vs. G 0.15 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs4045131 chr4:1228797 CTBP1 C - 13 A vs. G 0.467 (G) 0.233 (G) >1 (-) 17 (-) >0.05
rs730830 chr4:1240091 CTBP1 C - 13 T vs. C 0.125 (T) 0.008 (T) >1 (-) 0 (-) >0.05
rs1680058 chr4:1220043 CTBP1 C - 13 C vs. G 0.117 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs1250125 chr4:1192243 SPON2 C - 13 A vs. G 0.258 (G) 0.408 (G) <1 (-) 31 (-) >0.05
rs1250116 chr4:1224587 CTBP1 C - 13 T vs. C 0.15 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs1732110 chr4:1222563 CTBP1 C - 13 T vs. C 0.133 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs900019 chr4:1222836 CTBP1 C - 13 A vs. C 0.15 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs1250100 chr4:1236182 CTBP1 C - 13 A vs. G 0.133 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs884421 chr4:1227469 CTBP1 C - 13 T vs. C 0.15 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs1250112 chr4:1225723 CTBP1 C - 13 A vs. G 0.158 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs76146323 chr4:1187981 SPON2 C - 13 T vs. C 0.325 (T) - >1 (-) 9 (-) >0.05
rs4974633 chr4:1144702 SPON2 [-16018bp] C - 13 A vs. G 0.258 (A) 0.358 (A) >1 (-) 12 (-) >0.05
rs1250093 chr4:1240911 CTBP1 C - 13 A vs. G 0.125 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs1250115 chr4:1224631 CTBP1 C - 13 T vs. C 0.15 (C) 0.225 (C) >1 (-) 0 (-) >0.05
rs1250107 chr4:1229938 CTBP1 C - 13 A vs. C 0.15 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs1250090 chr4:1213697 CTBP1 C - 13 T vs. C 0.15 (T) 0.225 (T) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.