SRSF4, chr1:29474255-29508499 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12093597 chr1:29434821 EPB41 C - 13 T vs. C - - <1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1174879 chr1:29467782 SRSF4 [-6473bp] C - 13 C vs. G 0.067 (C) - >1 (-) 9 (-) >0.05
rs2993710 chr1:29451502 TMEM200B [+1055bp] C - 13 A vs. G 0.142 (A) 0.4 (G) <1 (-) 16 (-) >0.05
rs12402749 chr1:29461133 TMEM200B [+10686bp] C - 13 T vs. G 0.075 (T) 0.3 (T) >1 (-) 12 (-) >0.05
rs2483715 chr1:29505070 SRSF4 C - 13 A vs. G - - <1 (-) 2 (-) >0.05
rs145244689 chr1:29427693 EPB41 C - 11 A vs. G - - <1 (-) 39 (-) >0.05
rs116091072 chr1:29482531 SRSF4 C - 10 A vs. C 0.008 (A) - >1 (-) 2 (-) >0.05
rs3003629 chr1:29500422 SRSF4 C - 13 T vs. C 0.117 (T) 0.467 (C) <1 (-) 0 (-) >0.05
rs3003630 chr1:29451598 TMEM200B [+1151bp] C - 13 A vs. C 0.15 (A) 0.392 (C) <1 (-) 21 (-) >0.05
rs149296035 chr1:29498390 SRSF4 C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs2452784 chr1:29540063 MECR C - 13 C vs. G 0.142 (G) 0.442 (C) >1 (-) 0 (-) >0.05
rs61783708 chr1:29543800 MECR C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs1185776 chr1:29452682 TMEM200B [+2235bp] C - 13 T vs. C 0.167 (T) 0.392 (C) <1 (-) 19 (-) >0.05
rs2503013 chr1:29451895 TMEM200B [+1448bp] C - 13 T vs. C 0.167 (T) 0.4 (C) <1 (-) 19 (-) >0.05
rs72649268 chr1:29525439 MECR C - 13 T vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs143999363 chr1:29524965 MECR C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs78587717 chr1:29527975 MECR C - 10 T vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs3123564 chr1:29510732 SRSF4 [+2233bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2452769 chr1:29449888 TMEM200B C - 13 A vs. G 0.15 (A) 0.4 (G) <1 (-) 20 (-) >0.05
rs77280685 chr1:29463512 SRSF4 [-10743bp] C - 4 C vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs1062924 chr1:29529699 MECR C - 13 T vs. C 0.117 (T) 0.45 (C) <1 (-) 2 (-) >0.05
rs142295123 chr1:29529224 MECR C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs2452788 chr1:29446811 TMEM200B C - 13 A vs. G 0.15 (A) 0.417 (G) <1 (-) 21 (-) >0.05
rs3003636 chr1:29542926 MECR C - 13 A vs. T 0.133 (A) 0.458 (T) <1 (-) 4 (-) >0.05
rs1689263 chr1:29450173 TMEM200B C - 13 A vs. G 0.15 (A) 0.392 (G) <1 (-) 19 (-) >0.05
rs2503012 chr1:29455002 TMEM200B [+4555bp] C - 13 A vs. G 0.15 (G) 0.392 (A) >1 (-) 19 (-) >0.05
rs2483717 chr1:29457885 TMEM200B [+7438bp] C - 13 A vs. G 0.183 (A) 0.35 (G) <1 (-) 19 (-) >0.05
rs113292219 chr1:29486128 SRSF4 C - 12 T vs. C 0.025 (T) - <1 (-) 1 (-) >0.05
rs1128400 chr1:29542637 MECR C - 13 A vs. G 0.117 (A) 0.458 (G) <1 (-) 5 (-) >0.05
rs2640468 chr1:29541404 MECR C - 13 T vs. C 0.117 (C) 0.458 (T) >1 (-) 3 (-) >0.05
rs2640463 chr1:29531287 MECR C - 13 T vs. C 0.117 (T) 0.458 (C) <1 (-) 3 (-) >0.05
rs3103882 chr1:29518293 MECR [-1092bp] C - 13 A vs. G 0.117 (A) 0.458 (G) <1 (-) 2 (-) >0.05
rs2493843 chr1:29436742 EPB41 C - 13 A vs. G 0.158 (G) 0.392 (A) >1 (-) 17 (-) >0.05
rs140631705 chr1:29540728 MECR C - 13 T vs. C - - <1 (-) 23 (-) >0.05
rs7549567 chr1:29434780 EPB41 C - 13 A vs. C - - <1 (-) 22 (-) >0.05
rs1689265 chr1:29459117 TMEM200B [+8670bp] C - 13 A vs. G 0.092 (A) 0.333 (G) <1 (-) 8 (-) >0.05
rs2249138 chr1:29443723 EPB41 C - 13 A vs. G 0.142 (A) 0.392 (G) <1 (-) 20 (-) >0.05
rs2452772 chr1:29525280 MECR C - 13 C vs. G - - >1 (-) 1 (-) >0.05
rs2503022 chr1:29436595 EPB41 C - 13 T vs. C 0.142 (T) 0.4 (C) <1 (-) 21 (-) >0.05
rs2452770 chr1:29428170 EPB41 C - 13 C vs. G 0.158 (C) 0.392 (G) <1 (-) 22 (-) >0.05
rs2640466 chr1:29557224 MECR C - 13 T vs. C 0.15 (C) 0.458 (T) >1 (-) 0 (-) >0.05
rs2819606 chr1:29556399 MECR C - 13 A vs. G 0.142 (A) 0.458 (G) <1 (-) 0 (-) >0.05
rs2640470 chr1:29549670 MECR C - 13 A vs. G 0.125 (A) 0.458 (G) <1 (-) 4 (-) >0.05
rs2640464 chr1:29519778 MECR C - 13 T vs. G 0.117 (T) 0.458 (G) <1 (-) 0 (-) >0.05
rs3000851 chr1:29516090 MECR [-3295bp] C - 13 A vs. G 0.117 (A) 0.458 (G) <1 (-) 1 (-) >0.05
rs12059677 chr1:29514247 MECR [-5138bp] C - 13 A vs. G - - <1 (-) 4 (-) >0.05
rs2250742 chr1:29550460 MECR C - 13 A vs. G 0.117 (A) 0.45 (G) <1 (-) 4 (-) >0.05
rs2250643 chr1:29550902 MECR C - 13 A vs. C 0.125 (A) 0.45 (C) <1 (-) 4 (-) >0.05
rs9578 chr1:29445598 EPB41 C - 13 A vs. G 0.3 (G) - <1 (-) 20 (-) >0.05
rs1185779 chr1:29433064 EPB41 C - 13 T vs. C 0.3 (T) - >1 (-) 23 (-) >0.05
rs2819608 chr1:29473838 SRSF4 [-417bp] C - 12 C vs. G 0.208 (G) 0.1 (C) >1 (-) 8 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.