SRSF4, chr1:29474255-29508499 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12093597 chr1:29434821 EPB41 C - 13 T vs. C - - <1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72649252 chr1:29461638 TMEM200B [+11191bp] C - 13 T vs. C 0.067 (T) - <1 (-) 18 (-) >0.05
rs471099 chr1:29444720 EPB41 C - 13 A vs. G - - <1 (-) 23 (-) >0.05
rs755293 chr1:29460648 TMEM200B [+10201bp] C - 13 A vs. G 0.1 (G) 0.483 (A) >1 (-) 4 (-) >0.05
rs493564 chr1:29507100 SRSF4 C - 13 A vs. C 0.117 (A) 0.458 (C) <1 (-) 2 (-) >0.05
rs2250641 chr1:29550973 MECR C - 13 A vs. C 0.117 (C) 0.458 (A) >1 (-) 4 (-) >0.05
rs2428558 chr1:29500815 SRSF4 C - 13 T vs. C 0.117 (T) 0.458 (C) <1 (-) 2 (-) >0.05
rs2493846 chr1:29463637 SRSF4 [-10618bp] C - 13 T vs. C - - <1 (-) 8 (-) >0.05
rs2428557 chr1:29508621 SRSF4 [+122bp] C - 13 A vs. C 0.117 (C) 0.458 (A) >1 (-) 2 (-) >0.05
rs2483714 chr1:29499425 SRSF4 C - 13 T vs. G 0.125 (T) 0.458 (G) <1 (-) 2 (-) >0.05
rs2503019 chr1:29513998 MECR [-5387bp] C - 13 A vs. G 0.117 (G) 0.442 (A) >1 (-) 1 (-) >0.05
rs2493847 chr1:29461580 TMEM200B [+11133bp] C - 13 T vs. G 0.133 (T) 0.483 (G) <1 (-) 6 (-) >0.05
rs2486196 chr1:29463000 SRSF4 [-11255bp] C - 13 T vs. G 0.108 (T) 0.475 (G) <1 (-) 6 (-) >0.05
rs2493845 chr1:29492225 SRSF4 C - 13 T vs. C 0.142 (T) 0.442 (C) <1 (-) 3 (-) >0.05
rs2428556 chr1:29509603 SRSF4 [+1104bp] C - 13 T vs. C 0.117 (C) 0.458 (T) >1 (-) 8 (-) >0.05
rs138041766 chr1:29503976 SRSF4 C - 6 A vs. T - - <1 (-) 13 (-) >0.05
rs2483718 chr1:29466002 SRSF4 [-8253bp] C - 13 A vs. G 0.108 (A) 0.458 (G) <1 (-) 5 (-) >0.05
rs2486197 chr1:29428275 EPB41 C - 13 A vs. G 0.017 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs6691387 chr1:29467221 SRSF4 [-7034bp] C - 13 T vs. C - - <1 (-) 6 (-) >0.05
rs72649275 chr1:29556413 MECR C - 13 A vs. C 0.108 (A) 0.342 (A) <1 (-) 26 (-) >0.05
rs114225753 chr1:29517691 MECR [-1694bp] C - 13 C vs. G 0.017 (C) - >1 (-) 36 (-) >0.05
rs151186404 chr1:29427381 EPB41 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs2452782 chr1:29474134 SRSF4 [-121bp] C - 13 A vs. C 0.117 (A) 0.458 (C) <1 (-) 5 (-) >0.05
rs2819609 chr1:29546040 MECR C - 13 A vs. G 0.117 (A) 0.458 (G) <1 (-) 0 (-) >0.05
rs117680857 chr1:29428167 EPB41 C - 3 A vs. G - 0.083 (A) <1 (-) 1 (-) >0.05
rs72649256 chr1:29479430 SRSF4 C - 13 T vs. G 0.067 (T) - <1 (-) 5 (-) >0.05
rs145895866 chr1:29517713 MECR [-1672bp] C - 12 A vs. C - - >1 (-) 22 (-) >0.05
rs2230679 chr1:29475648 SRSF4 C - 13 T vs. G 0.108 (T) 0.425 (G) <1 (-) 0 (-) >0.05
rs115423512 chr1:29517352 MECR [-2033bp] C - 8 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs59331219 chr1:29436313 EPB41 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs140694551 chr1:29517676 MECR [-1709bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs10915227 chr1:29430306 EPB41 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12138928 chr1:29554506 MECR C - 13 T vs. C 0.25 (C) 0.05 (C) <1 (-) 16 (-) >0.05
rs2291609 chr1:29550991 MECR C - 13 T vs. G 0.258 (T) 0.05 (T) >1 (-) 20 (-) >0.05
rs145025887 chr1:29479951 SRSF4 C - 4 T vs. C - - <1 (-) 31 (-) >0.05
rs56336059 chr1:29469766 SRSF4 [-4489bp] C - 13 T vs. C - - <1 (-) 21 (-) >0.05
rs141517213 chr1:29476154 SRSF4 C - 4 T vs. C - - >1 (-) 41 (-) >0.05
rs12135886 chr1:29548647 MECR C - 13 A vs. C - - >1 (-) 16 (-) >0.05
rs61605515 chr1:29473380 SRSF4 [-875bp] C - 13 A vs. G - - >1 (-) 14 (-) >0.05
rs471895 chr1:29488290 SRSF4 C - 13 T vs. C - - <1 (-) 13 (-) >0.05
rs138437892 chr1:29456797 TMEM200B [+6350bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs556897 chr1:29480342 SRSF4 C - 13 A vs. G - - <1 (-) 14 (-) >0.05
rs143287327 chr1:29455697 TMEM200B [+5250bp] C - 4 T vs. C - - >1 (-) 36 (-) >0.05
rs117548969 chr1:29451398 TMEM200B [+951bp] C - 13 C vs. G - 0.233 (C) >1 (-) 2 (-) >0.05
rs547976 chr1:29503214 SRSF4 C - 13 A vs. G 0.258 (A) 0.05 (A) >1 (-) 14 (-) >0.05
rs548960 chr1:29494019 SRSF4 C - 13 T vs. C - - >1 (-) 15 (-) >0.05
rs79539478 chr1:29516138 MECR [-3247bp] C - 3 T vs. C - 0.075 (T) <1 (-) 0 (-) >0.05
rs144907768 chr1:29462219 TMEM200B [+11772bp] C - 5 T vs. C - - <1 (-) 15 (-) >0.05
chr1:29460154 chr1:29460154 TMEM200B [+9707bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
chr1:29460147 chr1:29460147 TMEM200B [+9700bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs78852165 chr1:29551674 MECR C - 11 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.