STK39, chr2:168810530-169104651 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1955337 chr2:169129145 STK39 [+24494bp] All: C 120,238 21 T vs. G 0.083 (T) 0.317 (T) 1.21 (1.16-1.26) 17 (0-51) 1.67e-20
Meta_image?name=rs1955337

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71430615 chr2:168903490 STK39 C - 13 T vs. C 0.108 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs77374722 chr2:168983257 STK39 C - 13 A vs. G - 0.067 (A) <1 (-) 0 (-) >0.05
rs4667993 chr2:168847457 STK39 C - 13 T vs. C 0.342 (C) 0.225 (C) <1 (-) 11 (-) >0.05
rs56988457 chr2:169116475 STK39 [+11824bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs72884536 chr2:169094179 STK39 C - 13 A vs. G 0.3 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs10930316 chr2:169095090 STK39 C - 13 A vs. C 0.308 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs13005420 chr2:168871026 STK39 C - 13 T vs. C 0.117 (C) - <1 (-) 0 (-) >0.05
rs10930303 chr2:168897204 STK39 C - 13 A vs. G 0.117 (G) - <1 (-) 0 (-) >0.05
rs1400635 chr2:169095296 STK39 C - 13 A vs. G 0.317 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs4668014 chr2:168943765 STK39 C - 13 A vs. G 0.075 (G) 0.233 (G) <1 (-) 41 (-) >0.05
rs140976065 chr2:168972530 STK39 C - 12 A vs. C - - <1 (-) 17 (-) >0.05
rs895864 chr2:168972570 STK39 C - 12 A vs. G 0.008 (A) 0.0 (A) <1 (-) 17 (-) >0.05
rs10169506 chr2:168896548 STK39 C - 13 T vs. C 0.133 (T) 0.258 (T) >1 (-) 0 (-) >0.05
rs78755366 chr2:168985315 STK39 C - 13 A vs. C - 0.192 (A) >1 (-) 0 (-) >0.05
rs2176399 chr2:168985061 STK39 C - 13 T vs. C 0.208 (C) 0.208 (C) >1 (-) 49 (-) >0.05
rs75420743 chr2:169125429 STK39 [+20778bp] C - 12 T vs. C 0.008 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs2138753 chr2:168985302 STK39 C - 13 A vs. G 0.217 (A) 0.208 (A) <1 (-) 49 (-) >0.05
rs1813140 chr2:168971114 STK39 C - 12 T vs. C 0.008 (C) 0.0 (C) >1 (-) 17 (-) >0.05
rs7558277 chr2:168874178 STK39 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2048919 chr2:169128385 STK39 [+23734bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs146970365 chr2:168978836 STK39 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs13029090 chr2:168871271 STK39 C - 13 T vs. C 0.117 (T) - >1 (-) 0 (-) >0.05
rs75152488 chr2:169122864 STK39 [+18213bp] C - 12 C vs. G - 0.075 (G) >1 (-) 0 (-) >0.05
rs34721810 chr2:168890157 STK39 C - 13 T vs. C 0.108 (T) - >1 (-) 0 (-) >0.05
rs6724737 chr2:168954452 STK39 C - 12 A vs. T 0.008 (T) - >1 (-) 17 (-) >0.05
rs12997412 chr2:168876821 STK39 C - 13 T vs. C 0.117 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs11673720 chr2:168819105 STK39 C - 13 A vs. G 0.45 (A) 0.45 (A) <1 (-) 0 (-) >0.05
rs144488406 chr2:168893052 STK39 C - 10 A vs. T - - >1 (-) 19 (-) >0.05
rs67329126 chr2:168827653 STK39 C - 13 A vs. G 0.125 (A) 0.383 (A) <1 (-) 10 (-) >0.05
rs78951480 chr2:168860694 STK39 C - 10 T vs. C 0.017 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs79200035 chr2:168933420 STK39 C - 13 C vs. G 0.017 (G) 0.225 (G) <1 (-) 0 (-) >0.05
rs6741749 chr2:168897267 STK39 C - 13 T vs. C 0.133 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs74742105 chr2:168979699 STK39 C - 13 A vs. G - 0.225 (A) >1 (-) 0 (-) >0.05
rs17176969 chr2:168931197 STK39 C - 5 T vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs7558963 chr2:169026081 STK39 C - 13 A vs. T 0.267 (T) 0.2 (A) <1 (-) 0 (-) >0.05
rs7585865 chr2:169026089 STK39 C - 13 A vs. G 0.275 (A) 0.208 (G) >1 (-) 0 (-) >0.05
rs116593591 chr2:169086971 STK39 C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs10930299 chr2:168817002 STK39 C - 13 T vs. C 0.125 (T) 0.392 (T) <1 (-) 8 (-) >0.05
rs74528388 chr2:169151189 STK39 [+46538bp] C - 12 A vs. T 0.05 (A) - >1 (-) 0 (-) >0.05
rs139285181 chr2:168871178 STK39 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs80197801 chr2:168876537 STK39 C - 13 T vs. C 0.117 (T) - >1 (-) 0 (-) >0.05
rs145960954 chr2:168953944 STK39 C - 12 T vs. C - - >1 (-) 7 (-) >0.05
rs73974503 chr2:169070470 STK39 C - 13 T vs. C 0.317 (C) 0.208 (C) >1 (-) 20 (-) >0.05
rs12470996 chr2:168911618 STK39 C - 12 C vs. G - 0.217 (C) >1 (-) 19 (-) >0.05
rs17797694 chr2:169057880 STK39 C - 13 C vs. G 0.342 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs75042339 chr2:169098671 STK39 C - 4 T vs. C - - <1 (-) 57 (-) >0.05
rs1992760 chr2:168821511 STK39 C - 13 A vs. C 0.125 (A) 0.45 (A) <1 (-) 9 (-) >0.05
rs79405031 chr2:168936685 STK39 C - 13 A vs. G - 0.225 (G) <1 (-) 0 (-) >0.05
rs16854676 chr2:168936331 STK39 C - 13 A vs. G - 0.225 (A) >1 (-) 0 (-) >0.05
rs7584593 chr2:168890247 STK39 C - 13 A vs. G 0.008 (A) 0.258 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]