STX4, chr16:31044210-31054296 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2305880 chr16:30999462 HSD3B7 All: C 108,990 15 T vs. C 0.25 (T) 0.083 (T) 0.91 (0.88-0.94) 26 (0-60) 5.21e-08
Meta_image?name=rs2305880

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12920772 chr16:31012781 STX1B All: C 108,990 15 A vs. G - - 1.09 (1.06-1.13) 9 (0-46) 1.59e-07
rs8062719 chr16:31002664 STX1B All: C 108,990 15 A vs. G 0.25 (A) 0.083 (A) 0.91 (0.88-0.95) 17 (0-54) 1.98e-07
rs72800847 chr16:31022639 STX1B [+690bp] All: C 108,990 15 A vs. G 0.267 (A) 0.075 (A) 0.92 (0.89-0.95) 10 (0-48) 2.14e-07
rs729482 chr16:31016970 STX1B All: C 108,990 15 C vs. T 0.267 (C) 0.083 (C) 0.92 (0.89-0.95) 10 (0-47) 2.14e-07
rs8047803 chr16:31079834 ZNF668 All: C 108,990 15 C vs. A - - 1.09 (1.06-1.13) 15 (0-52) 2.32e-07
rs71383767 chr16:31063949 ZNF668 [-8215bp] All: C 108,990 15 T vs. C - - 0.90 (0.86-0.93) 1 (0-54) 2.82e-07
rs3751855 chr16:31091209 ZNF646 All: C 108,990 15 C vs. T 0.283 (C) 0.092 (C) 0.92 (0.89-0.95) 22 (0-58) 2.91e-07
rs732173 chr16:31050023 STX4 All: C 108,990 15 A vs. C 0.267 (A) 0.083 (A) 0.92 (0.89-0.95) 10 (0-47) 2.96e-07
rs732172 chr16:31050033 STX4 All: C 108,990 15 T vs. C 0.267 (T) 0.083 (T) 0.92 (0.89-0.95) 10 (0-47) 2.97e-07
rs7500176 chr16:31041137 STX4 [-3073bp] All: C 108,990 15 G vs. A - - 1.09 (1.06-1.13) 10 (0-47) 3.01e-07
rs11640767 chr16:31060647 STX4 [+6351bp] All: C 108,990 15 G vs. A - - 1.09 (1.06-1.13) 14 (0-52) 3.11e-07
rs34649473 chr16:31066538 ZNF668 [-5626bp] All: C 108,990 15 T vs. G - - 0.92 (0.89-0.95) 16 (0-54) 3.12e-07
rs11640957 chr16:31060363 STX4 [+6067bp] All: C 108,990 15 C vs. T - - 1.09 (1.06-1.13) 13 (0-51) 3.20e-07
rs57434408 chr16:31066380 ZNF668 [-5784bp] All: C 108,990 15 C vs. A - - 1.09 (1.06-1.13) 13 (0-51) 3.44e-07
rs750952 chr16:31093954 ZNF646 All: C 108,990 15 T vs. C 0.283 (T) 0.083 (T) 0.92 (0.89-0.95) 14 (0-52) 3.53e-07
rs55979739 chr16:31049155 STX4 All: C 108,990 15 G vs. A 0.267 (G) 0.075 (G) 0.92 (0.89-0.95) 10 (0-47) 3.69e-07
rs8061047 chr16:31068960 ZNF668 [-3204bp] All: C 108,990 15 C vs. T 0.283 (C) 0.083 (C) 0.92 (0.89-0.95) 13 (0-51) 3.70e-07
rs9929899 chr16:31062701 STX4 [+8405bp] All: C 108,990 15 A vs. C 0.442 (A) 0.083 (C) 1.09 (1.05-1.12) 15 (0-52) 3.84e-07
rs11647284 chr16:31077335 ZNF668 All: C 108,990 15 A vs. G 0.275 (A) 0.075 (A) 0.92 (0.89-0.95) 10 (0-48) 3.99e-07
rs1108431 chr16:31054607 STX4 [+311bp] All: C 108,990 15 T vs. C 0.267 (T) 0.083 (T) 0.92 (0.89-0.95) 11 (0-49) 4.10e-07
rs2303222 chr16:31085470 ZNF668 All: C 108,990 15 C vs. T 0.442 (C) 0.058 (T) 1.09 (1.05-1.12) 16 (0-53) 4.32e-07
rs28814987 chr16:31081460 ZNF668 All: C 108,990 15 C vs. T - - 1.09 (1.05-1.13) 12 (0-50) 4.42e-07
rs73530203 chr16:31099859 PRSS53 All: C 108,990 15 A vs. G 0.283 (A) 0.1 (A) 0.92 (0.89-0.95) 12 (0-50) 4.68e-07
rs11642003 chr16:31068391 ZNF668 [-3773bp] All: C 108,990 15 G vs. A - - 1.11 (1.06-1.15) 14 (0-52) 1.72e-06
rs11642303 chr16:31068392 ZNF668 [-3772bp] All: C 108,990 15 C vs. A - - 1.11 (1.06-1.15) 14 (0-52) 1.72e-06
rs7294 chr16:31102321 VKORC1 All: C 101,866 13 T vs. C 0.283 (T) 0.092 (T) 0.92 (0.89-0.96) 19 (0-57) 5.54e-06
rs11864839 chr16:31095251 ZNF646 C - 13 C vs. G 0.283 (C) 0.092 (C) <1 (-) 25 (-) <1.00e-04
rs7199949 chr16:31096164 PRSS53 C - 13 C vs. G 0.283 (C) 0.05 (C) <1 (-) 19 (-) <1.00e-04
rs35713203 chr16:31090407 ZNF646 C - 13 C vs. G 0.283 (C) 0.092 (C) <1 (-) 14 (-) <1.00e-04
rs59061704 chr16:31062704 STX4 [+8408bp] C - 13 C vs. G 0.283 (C) 0.05 (C) <1 (-) 12 (-) <1.00e-04
rs9939558 chr16:31038687 STX4 [-5523bp] C - 13 A vs. T - - >1 (-) 5 (-) <0.05
rs11150604 chr16:31037020 STX4 [-7190bp] C - 13 A vs. T 0.442 (T) 0.042 (A) <1 (-) 2 (-) <0.05
rs2288004 chr16:31054040 STX4 C - 13 C vs. G 0.425 (C) 0.083 (G) >1 (-) 0 (-) <0.05
rs4889530 chr16:31065918 ZNF668 [-6246bp] C - 13 A vs. T 0.442 (A) 0.075 (T) >1 (-) 0 (-) <0.05
rs17855121 chr16:31004169 STX1B C - 13 T vs. C 0.192 (C) - >1 (-) 37 (-) <0.05
rs75586365 chr16:30996363 SETD1A C - 13 T vs. C 0.083 (T) - <1 (-) 0 (-) <0.05
rs79974799 chr16:30996795 HSD3B7 C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) <0.05
rs17849880 chr16:30999198 HSD3B7 C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) <0.05
rs7201018 chr16:31005389 STX1B C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs78522165 chr16:31090094 ZNF646 C - 11 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs117126734 chr16:31000894 STX1B C - 12 T vs. C 0.008 (C) - >1 (-) 0 (-) >0.05
rs72785511 chr16:31059325 STX4 [+5029bp] C - 12 T vs. C 0.075 (C) - >1 (-) 7 (-) >0.05
rs75896762 chr16:31052140 STX4 C - 8 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs12928868 chr16:31008964 STX1B C - 3 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs117291523 chr16:31035543 STX4 [-8667bp] C - 8 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs111907968 chr16:31037652 STX4 [-6558bp] C - 9 T vs. C 0.008 (T) - <1 (-) 9 (-) >0.05
rs72800841 chr16:31014247 STX1B C - 13 A vs. G 0.308 (A) - >1 (-) 48 (-) >0.05
rs77353311 chr16:31010999 STX1B C - 11 A vs. G 0.142 (G) - <1 (-) 45 (-) >0.05
rs55731737 chr16:31017683 STX1B C - 13 C vs. G 0.292 (G) - <1 (-) 51 (-) >0.05
rs72800842 chr16:31015439 STX1B C - 13 A vs. C 0.292 (A) - >1 (-) 48 (-) >0.05

Association studies for this region [+]