Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (PROGENI-GenePD) C UKPDSBB CL 828 (40%) 852 (60%) 62 (11) - - - 55 (13) - 9,762

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3803661 chr16:52586477 TOX3 [+4763bp] A vs. G All: C 15 108,990 0.242 (A) 0.375 (G) 1.07 (1.04-1.11) 0 (0-45) 6.33e-05
rs4784227 chr16:52599188 TOX3 [+17474bp] T vs. C All: C 15 108,990 0.208 (T) 0.217 (T) 1.09 (1.05-1.13) 0 (0-51) 5.77e-06
rs3104766 chr16:52624535 TOX3 [+42821bp] A vs. C All: C 15 108,990 0.408 (A) 0.183 (C) 1.07 (1.04-1.10) 27 (0-60) 5.06e-05
rs3104767 chr16:52624738 TOX3 [+43024bp] T vs. G All: C 15 108,990 0.4 (T) 0.183 (G) 1.07 (1.04-1.10) 27 (0-61) 5.03e-05
rs3112626 chr16:52625200 TOX3 [+43486bp] G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.03-1.10) 26 (0-60) 7.82e-05
rs3112625 chr16:52625552 TOX3 [+43838bp] G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.03-1.10) 24 (0-59) 7.91e-05
rs12920540 chr16:52625613 TOX3 [+43899bp] A vs. C All: C 15 108,990 0.383 (A) 0.458 (A) 1.07 (1.03-1.10) 33 (0-64) 9.79e-05
rs3104768 chr16:52626396 TOX3 [+44682bp] A vs. G All: C 15 108,990 0.4 (A) 0.183 (G) 1.07 (1.04-1.10) 28 (0-61) 4.84e-05
rs3112624 chr16:52626551 TOX3 [+44837bp] G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.04-1.10) 28 (0-61) 4.84e-05
rs3104769 chr16:52627231 TOX3 [+45517bp] T vs. C All: C 15 108,990 0.4 (T) 0.2 (C) 1.07 (1.04-1.11) 29 (0-62) 3.64e-05
rs3112623 chr16:52627526 TOX3 [+45812bp] G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.04-1.10) 28 (0-61) 4.90e-05
rs11860769 chr16:52628537 TOX3 [+46823bp] A vs. G All: C 15 108,990 - - 0.94 (0.91-0.97) 29 (0-62) 4.87e-05
rs11861036 chr16:52628564 TOX3 [+46850bp] C vs. T All: C 15 108,990 0.4 (C) - 1.07 (1.04-1.10) 28 (0-62) 5.01e-05
rs3104772 chr16:52629326 TOX3 [+47612bp] A vs. G All: C 15 108,990 0.4 (A) 0.183 (G) 1.07 (1.04-1.10) 30 (0-62) 4.06e-05
rs3104773 chr16:52629436 TOX3 [+47722bp] A vs. G All: C 15 108,990 0.408 (A) 0.183 (G) 1.07 (1.04-1.10) 29 (0-62) 4.70e-05
rs3112622 chr16:52629503 TOX3 [+47789bp] C vs. T All: C 15 108,990 0.4 (C) 0.183 (T) 1.07 (1.04-1.10) 29 (0-62) 4.71e-05
rs3104774 chr16:52629702 TOX3 [+47988bp] A vs. G All: C 15 108,990 0.4 (A) 0.183 (G) 1.07 (1.04-1.11) 30 (0-62) 3.10e-05
rs3104775 chr16:52629827 TOX3 [+48113bp] A vs. G All: C 15 108,990 0.408 (A) 0.183 (G) 1.07 (1.04-1.10) 29 (0-62) 4.68e-05
rs3112621 chr16:52630349 TOX3 [+48635bp] G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.03-1.10) 29 (0-62) 6.39e-05
rs3104776 chr16:52631462 TOX3 [+49748bp] G vs. A All: C 15 108,990 0.408 (G) 0.183 (A) 1.07 (1.03-1.10) 31 (0-63) 5.41e-05
rs3112617 chr16:52631717 intergenic G vs. T All: C 15 108,990 0.4 (G) 0.183 (T) 1.07 (1.03-1.10) 32 (0-63) 5.33e-05
rs3112616 chr16:52631747 intergenic G vs. T All: C 15 108,990 0.383 (G) 0.183 (T) 1.07 (1.03-1.10) 31 (0-63) 5.47e-05
rs11075551 chr16:52631964 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.183 (A) 1.07 (1.03-1.10) 32 (0-64) 5.72e-05
rs3112615 chr16:52632350 intergenic C vs. A All: C 15 108,990 0.4 (C) 0.167 (A) 1.07 (1.03-1.10) 32 (0-64) 5.85e-05
rs3104777 chr16:52632631 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.183 (C) 1.07 (1.03-1.10) 32 (0-64) 5.88e-05
rs45500599 chr16:52632897 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.183 (G) 1.07 (1.03-1.10) 33 (0-64) 5.61e-05
rs12929797 chr16:52632944 intergenic T vs. C All: C 15 108,990 0.392 (T) 0.467 (T) 1.07 (1.03-1.10) 37 (0-66) 7.25e-05
rs3104778 chr16:52633652 intergenic G vs. A All: C 15 108,990 0.392 (G) 0.183 (A) 1.07 (1.04-1.10) 33 (0-64) 3.64e-05
rs3104779 chr16:52633657 intergenic G vs. A All: C 15 108,990 0.383 (G) 0.175 (A) 1.07 (1.04-1.10) 33 (0-64) 3.65e-05
rs3104780 chr16:52633914 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.183 (C) 1.07 (1.04-1.10) 33 (0-64) 4.12e-05
rs3104781 chr16:52634000 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.183 (C) 1.07 (1.03-1.10) 34 (0-64) 6.99e-05
rs3112613 chr16:52634163 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 32 (0-63) 7.71e-05
rs12922061 chr16:52635000 intergenic T vs. C All: C 15 108,990 0.208 (T) 0.283 (T) 1.09 (1.05-1.13) 32 (0-63) 1.21e-05
rs3112612 chr16:52635164 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 34 (0-64) 6.69e-05
rs3104783 chr16:52636242 intergenic A vs. C All: C 15 108,990 0.392 (A) 0.175 (C) 1.07 (1.04-1.10) 33 (0-64) 4.64e-05
rs3104784 chr16:52636365 intergenic C vs. A All: C 15 108,990 0.4 (C) 0.175 (A) 1.07 (1.03-1.10) 32 (0-63) 7.25e-05
rs3104786 chr16:52637363 intergenic G vs. A All: C 15 108,990 0.408 (G) 0.175 (A) 1.07 (1.03-1.10) 34 (0-64) 5.75e-05
rs4578643 chr16:52637435 intergenic T vs. G All: C 15 108,990 0.4 (T) 0.467 (T) 1.07 (1.03-1.10) 38 (0-67) 5.39e-05
rs3104787 chr16:52637543 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.03-1.10) 34 (0-65) 5.71e-05
rs3104788 chr16:52638503 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.04-1.10) 35 (0-65) 5.07e-05
rs3104789 chr16:52638548 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.04-1.10) 34 (0-64) 5.13e-05
rs3104790 chr16:52638663 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.175 (C) 1.07 (1.03-1.10) 35 (0-65) 5.43e-05
rs4290467 chr16:52638759 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.467 (G) 1.07 (1.03-1.10) 38 (0-67) 7.38e-05
rs3104791 chr16:52638962 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 34 (0-65) 5.77e-05
rs4238749 chr16:52639234 intergenic A vs. C All: C 15 108,990 0.4 (A) 0.467 (A) 1.07 (1.03-1.10) 37 (0-66) 7.47e-05
rs4238750 chr16:52639236 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.467 (T) 1.07 (1.03-1.10) 37 (0-66) 7.44e-05
rs1112135 chr16:52639755 intergenic T vs. C All: C 15 108,990 0.392 (T) 0.467 (T) 1.07 (1.04-1.10) 39 (0-67) 5.93e-05
rs3104793 chr16:52641186 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.03-1.10) 32 (0-64) 7.21e-05
rs3104796 chr16:52642377 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.175 (A) 1.07 (1.03-1.11) 33 (0-64) 9.70e-05
rs3104797 chr16:52644450 intergenic C vs. A All: C 15 108,990 0.375 (C) 0.175 (A) 1.07 (1.04-1.11) 32 (0-64) 9.65e-05