Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (PROGENI-GenePD) C UKPDSBB CL 828 (40%) 852 (60%) 62 (11) - - - 55 (13) - 9,762

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3104800 chr16:52646376 intergenic A vs. G All: C 15 108,990 0.367 (A) 0.4 (G) 1.08 (1.04-1.12) 45 (0-70) 4.50e-05
rs3112611 chr16:52647170 intergenic T vs. G All: C 15 108,990 0.367 (T) 0.392 (G) 1.08 (1.04-1.12) 44 (0-70) 4.30e-05
rs3112610 chr16:52648554 intergenic A vs. G All: C 15 108,990 0.367 (A) 0.392 (G) 1.08 (1.04-1.12) 44 (0-70) 4.60e-05
rs3112606 chr16:52650909 intergenic C vs. T All: C 15 108,990 0.45 (C) 0.392 (T) 1.09 (1.05-1.14) 45 (0-70) 4.45e-05
rs2001579 chr16:54234158 intergenic G vs. A All: C 15 108,990 0.467 (G) 0.292 (A) 0.94 (0.91-0.97) 0 (-) 9.97e-05
rs12448908 chr16:54239870 intergenic C vs. T All: C 15 108,990 0.425 (C) 0.275 (T) 0.94 (0.91-0.97) 0 (-) 8.33e-05
rs9921416 chr16:54244754 intergenic T vs. C All: C 15 108,990 0.425 (T) 0.292 (C) 0.95 (0.92-0.98) 0 (-) 4.12e-04
rs72815259 chr16:54502704 intergenic C vs. A All: C 15 108,990 0.25 (C) 0.017 (G) 0.93 (0.89-0.96) 22 (0-58) 9.06e-05
rs56033824 chr16:54502860 intergenic A vs. G All: C 15 108,990 0.242 (A) 0.042 (A) 0.93 (0.89-0.96) 20 (0-57) 1.20e-04
rs145114714 chr16:63095499 intergenic A vs. G All: C 11 95,804 - - 2.02 (1.42-2.87) 12 (0-52) 8.60e-05
rs4887855 chr16:76432398 CNTNAP4 T vs. C All: C 15 108,990 0.108 (T) 0.392 (T) 0.87 (0.81-0.93) 0 (0-40) 6.95e-05
rs4360964 chr16:76433088 CNTNAP4 G vs. A All: C 15 108,990 0.075 (G) 0.392 (G) 0.89 (0.84-0.95) 16 (0-54) 1.37e-04
rs34133162 chr16:89780672 VPS9D1 A vs. G All: C 14 105,041 0.158 (A) 0.033 (A) 1.15 (1.08-1.22) 0 (0-33) 1.51e-05
rs8054492 chr16:89802719 ZNF276 G vs. A All: C 15 108,990 - - 0.91 (0.87-0.96) 0 (0-44) 2.63e-04
rs12924101 chr16:89862906 FANCA C vs. A All: C 15 108,990 0.192 (C) 0.067 (C) 1.08 (1.03-1.13) 0 (0-48) 6.47e-04
rs11078677 chr17:7321858 NLGN2 T vs. C All: C 14 105,041 0.392 (T) 0.158 (T) 0.93 (0.90-0.96) 0 (0-36) 6.26e-05
rs60856990 chr17:7337853 TMEM102 [-909bp] G vs. A All: C 14 105,041 - - 1.08 (1.04-1.12) 0 (0-21) 1.21e-05
rs4151121 chr17:7342294 FGF11 G vs. A All: C 14 105,041 0.375 (G) - 0.93 (0.90-0.96) 0 (0-15) 1.63e-05
rs11869879 chr17:7342806 FGF11 T vs. C All: C 14 105,041 0.358 (T) - 0.93 (0.90-0.96) 0 (0-17) 2.08e-05
rs17856697 chr17:7348625 CHRNB1 G vs. A All: C 14 105,041 0.358 (G) - 0.93 (0.90-0.96) 0 (0-17) 3.96e-05
rs7215056 chr17:7350050 CHRNB1 A vs. C All: C 15 108,990 0.225 (A) - 1.08 (1.04-1.12) 46 (1-70) 1.44e-04
rs12451961 chr17:7351479 CHRNB1 A vs. G All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-45) 4.76e-06
rs72842824 chr17:7352910 CHRNB1 A vs. G All: C 15 108,990 0.233 (A) - 1.08 (1.04-1.12) 43 (0-69) 8.20e-05
rs67328311 chr17:7352976 CHRNB1 T vs. G All: C 15 108,990 0.392 (T) 0.267 (T) 1.09 (1.05-1.12) 0 (0-51) 1.34e-06
rs12600861 chr17:7355621 CHRNB1 A vs. C All: C 15 108,990 - - 0.92 (0.89-0.96) 0 (0-48) 4.10e-06
rs7210231 chr17:7357864 CHRNB1 A vs. C All: C 15 108,990 0.225 (A) 0.033 (A) 1.08 (1.04-1.12) 46 (1-70) 8.99e-05
rs2302761 chr17:7358520 CHRNB1 T vs. C All: C 15 108,990 0.225 (T) 0.033 (T) 1.08 (1.04-1.12) 46 (1-70) 9.01e-05
rs56074046 chr17:7358930 CHRNB1 A vs. G All: C 15 108,990 0.358 (A) - 0.93 (0.90-0.97) 0 (0-32) 4.38e-05
rs9217 chr17:7363088 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.25 (C) 1.08 (1.05-1.12) 0 (0-52) 4.54e-06
rs34474914 chr17:7368242 ZBTB4 A vs. G All: C 15 108,990 - - 1.07 (1.03-1.10) 0 (0-34) 1.34e-04
rs55749333 chr17:7371932 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.267 (C) 1.08 (1.04-1.11) 0 (0-49) 1.39e-05
rs12942267 chr17:7372637 ZBTB4 T vs. C All: C 15 108,990 - - 0.93 (0.90-0.96) 1 (0-54) 1.96e-05
rs7209131 chr17:7376411 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.208 (C) 1.07 (1.04-1.11) 0 (0-48) 2.12e-05
rs55894190 chr17:7383238 ZBTB4 C vs. T All: C 15 108,990 0.425 (C) 0.308 (C) 1.07 (1.04-1.11) 0 (0-35) 3.10e-05
rs8076642 chr17:7383984 ZBTB4 G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-39) 2.76e-05
rs8081271 chr17:7384628 ZBTB4 A vs. G All: C 15 108,990 0.433 (A) 0.325 (A) 1.07 (1.04-1.11) 0 (0-40) 2.63e-05
rs11078680 chr17:7386428 ZBTB4 A vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 2.57e-05
rs2309751 chr17:7391524 POLR2A G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 1.78e-05
rs11651206 chr17:7392204 POLR2A A vs. C All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 1.10e-05
rs11650977 chr17:7392341 POLR2A G vs. A All: C 15 108,990 0.425 (G) 0.325 (G) 1.07 (1.04-1.11) 0 (0-38) 1.79e-05
rs3853821 chr17:7396327 POLR2A G vs. T All: C 15 108,990 0.417 (G) 0.317 (G) 1.07 (1.04-1.11) 0 (0-35) 1.26e-05
rs7225954 chr17:7397274 POLR2A G vs. A All: C 15 108,990 0.425 (G) 0.333 (G) 1.07 (1.04-1.11) 0 (0-35) 2.20e-05
rs56226499 chr17:7398223 POLR2A C vs. T All: C 15 108,990 0.425 (C) 0.317 (C) 1.07 (1.04-1.11) 0 (0-33) 1.69e-05
rs11658168 chr17:7406134 POLR2A A vs. G All: C 15 108,990 0.383 (A) 0.25 (A) 1.08 (1.04-1.11) 0 (0-46) 1.11e-05
rs8080690 chr17:7409499 POLR2A T vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-31) 1.35e-05
rs11078685 chr17:7411447 POLR2A C vs. T All: C 15 108,990 0.425 (C) 0.317 (C) 1.08 (1.04-1.11) 0 (0-31) 1.04e-05
rs6761 chr17:7417663 POLR2A C vs. T All: C 15 108,990 0.408 (C) 0.483 (C) 1.08 (1.04-1.11) 0 (0-26) 7.94e-06
rs62059777 chr17:7419645 POLR2A [+1712bp] A vs. G All: C 15 108,990 0.208 (A) - 1.07 (1.03-1.12) 39 (0-67) 3.00e-04
rs11078687 chr17:7421672 POLR2A [+3739bp] G vs. A All: C 15 108,990 0.417 (G) 0.483 (G) 1.08 (1.04-1.11) 0 (0-24) 7.21e-06
rs11655920 chr17:7421696 POLR2A [+3763bp] T vs. C All: C 15 108,990 0.408 (T) 0.483 (T) 1.08 (1.04-1.11) 0 (0-24) 7.12e-06