Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Germany (IPDGC) C UKPDSBB CL, PO 667 (40%) 937 (48%) 56 (12) - - - 47 (12) - 9,646

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2532276 chr17:44246624 KANSL1 A vs. C All: C 11 92,764 0.217 (A) - 0.78 (0.74-0.81) 0 (0-60) 6.53e-32
rs2532275 chr17:44246997 KANSL1 A vs. G All: C 11 92,764 0.217 (A) - 0.78 (0.75-0.81) 0 (0-59) 6.61e-32
rs2240759 chr17:44247415 KANSL1 T vs. C All: C 11 92,764 0.117 (T) 0.367 (T) 1.13 (1.07-1.20) 0 (0-19) 4.13e-05
rs62060895 chr17:44250236 KANSL1 G vs. T All: C 11 92,764 0.208 (G) - 0.71 (0.67-0.75) 0 (0-57) 8.06e-32
rs2240757 chr17:44250433 KANSL1 C vs. T All: C 11 92,764 0.117 (C) 0.367 (C) 1.13 (1.07-1.21) 0 (0-24) 3.80e-05
rs2696664 chr17:44251698 KANSL1 G vs. A All: C 11 92,764 - - 1.30 (1.24-1.36) 0 (0-60) 6.19e-32
rs79554691 chr17:44255143 KANSL1 G vs. A All: C 9 26,600 0.175 (G) - 0.60 (0.54-0.67) 0 (0-64) 5.86e-20
rs2732588 chr17:44262950 KANSL1 G vs. A All: C 10 88,826 0.408 (G) 0.117 (G) 1.23 (1.16-1.29) 6 (0-65) 1.07e-14
rs2532240 chr17:44265839 KANSL1 T vs. C All: C 10 88,826 0.458 (T) 0.492 (T) 0.78 (0.75-0.82) 43 (0-73) 6.19e-23
rs75449579 chr17:44270985 KANSL1 A vs. G All: C 8 22,662 0.192 (A) - 0.64 (0.57-0.71) 18 (0-61) 7.58e-17
rs2696466 chr17:44289832 KANSL1 A vs. G All: C 8 22,662 - - 1.40 (1.29-1.51) 27 (0-67) 1.11e-17
rs2469914 chr17:44293939 KANSL1 T vs. G All: C 8 22,662 - - 1.77 (1.55-2.02) 13 (0-55) 4.20e-17
rs199460 chr17:44764775 NSF A vs. C All: C 15 108,990 - - 1.34 (1.26-1.43) 35 (0-65) 7.10e-21
rs62074079 (chr17:44764981) chr17:44547284 LRRC37A2 [-41593bp] C vs. G All: C 15 108,990 - - 1.46 (1.37-1.56) 11 (0-48) 1.61e-33
rs143572569 chr17:44776843 NSF T vs. C All: C 13 42,826 - - 1.62 (1.47-1.78) 10 (0-49) 7.38e-23
rs200403 chr17:44781143 NSF A vs. C All: C 15 108,990 - - 1.27 (1.21-1.32) 26 (0-60) 2.49e-27
rs116988420 chr17:44782279 NSF C vs. G All: C 15 108,990 - - 1.46 (1.37-1.55) 6 (0-57) 1.40e-34
rs17692129 chr17:44793283 NSF T vs. C All: C 11 94,570 0.317 (T) 0.208 (T) 1.07 (1.03-1.11) 24 (0-62) 1.83e-04
rs199451 chr17:44801784 NSF A vs. G All: C 15 108,990 0.208 (A) - 0.78 (0.75-0.81) 10 (0-48) 5.80e-34
rs35937770 chr17:44808360 NSF A vs. G All: C 11 94,570 0.308 (A) 0.217 (A) 1.08 (1.04-1.12) 24 (0-62) 8.26e-05
rs199447 chr17:44812188 NSF T vs. C All: C 15 108,990 0.208 (T) - 0.78 (0.75-0.81) 12 (0-50) 5.75e-34
rs9912530 chr17:44836302 NSF [+1472bp] T vs. C All: C 15 108,990 0.275 (T) 0.275 (C) 0.81 (0.78-0.84) 23 (0-58) 1.42e-26
rs199530 chr17:44836653 NSF [+1823bp] G vs. A All: C 15 108,990 0.242 (G) 0.275 (A) 0.80 (0.77-0.83) 26 (0-60) 3.86e-29
rs199528 chr17:44843136 WNT3 T vs. C All: C 15 108,990 0.192 (T) - 0.77 (0.74-0.81) 19 (0-56) 2.37e-34
rs199526 chr17:44847707 WNT3 C vs. G All: C 15 108,990 0.192 (C) 0.292 (G) 0.78 (0.75-0.82) 20 (0-56) 9.25e-32
rs199525 chr17:44847834 WNT3 G vs. T All: C 15 108,990 0.2 (G) - 0.77 (0.74-0.81) 19 (0-56) 2.78e-34
rs3809857 chr17:44848314 WNT3 T vs. G All: C 11 94,570 0.3 (T) 0.217 (T) 1.10 (1.06-1.15) 34 (0-68) 9.26e-06
rs62074125 chr17:44852612 WNT3 C vs. A All: C 11 94,570 0.25 (C) - 1.16 (1.10-1.22) 28 (0-64) 3.06e-08
rs199518 chr17:44854580 WNT3 A vs. C All: C 15 108,990 0.217 (A) 0.325 (C) 0.79 (0.76-0.82) 24 (0-59) 1.74e-28
rs199517 chr17:44854587 WNT3 A vs. G All: C 15 108,990 0.233 (A) 0.283 (G) 0.79 (0.76-0.82) 23 (0-59) 1.42e-28
rs199510 chr17:44857929 WNT3 C vs. A All: C 15 108,990 - - 1.30 (1.24-1.35) 24 (0-59) 1.69e-32
rs199508 chr17:44858838 WNT3 C vs. G All: C 15 108,990 0.225 (C) 0.425 (G) 0.79 (0.76-0.83) 27 (0-61) 1.31e-29
rs199498 chr17:44865603 WNT3 C vs. T All: C 15 108,990 0.192 (C) 0.442 (T) 0.77 (0.74-0.81) 6 (0-56) 3.49e-29
rs199497 chr17:44866602 WNT3 C vs. T All: C 13 97,715 0.2 (C) - 0.84 (0.80-0.88) 43 (0-70) 2.27e-11
rs1563304 chr17:44874453 WNT3 T vs. C All: C 14 103,235 0.2 (T) 0.0 (T) 0.88 (0.85-0.92) 45 (0-70) 2.36e-08
rs3851781 chr17:44891301 WNT3 T vs. C All: C 15 108,990 0.492 (T) 0.267 (C) 1.09 (1.05-1.12) 0 (0-45) 5.07e-07
rs72836354 chr17:44899464 WNT3 A vs. G All: C 15 108,990 0.475 (A) 0.233 (G) 1.09 (1.05-1.12) 0 (0-22) 3.00e-07
rs3851782 chr17:44901654 WNT3 A vs. G All: C 15 108,990 0.45 (A) - 1.07 (1.04-1.11) 0 (0-27) 1.24e-05
rs34724124 chr17:44902516 WNT3 A vs. G All: C 15 108,990 0.475 (A) 0.242 (G) 1.09 (1.05-1.12) 0 (0-27) 6.88e-07
rs8069437 chr17:44906949 WNT3 T vs. C All: C 15 108,990 0.167 (T) 0.0 (T) 0.91 (0.88-0.95) 15 (0-53) 6.00e-06
rs2165846 chr17:44941366 WNT9B G vs. A All: C 15 108,990 0.417 (G) 0.1 (A) 1.09 (1.05-1.12) 0 (0-43) 4.27e-07
rs6504591 chr17:44944828 WNT9B G vs. T All: C 15 108,990 0.467 (G) 0.1 (G) 0.93 (0.90-0.96) 29 (0-62) 1.92e-05
rs60372268 chr17:44947756 WNT9B G vs. A All: C 15 108,990 0.258 (G) 0.483 (G) 1.14 (1.10-1.19) 0 (0-51) 9.61e-10
rs61619946 chr17:44947757 WNT9B C vs. T All: C 15 108,990 0.267 (C) - 1.14 (1.10-1.19) 0 (0-51) 9.58e-10
rs57986961 chr17:44947821 WNT9B A vs. G All: C 15 108,990 0.317 (A) 0.483 (A) 1.12 (1.08-1.17) 0 (0-52) 2.35e-09
rs11654422 chr17:44950237 WNT9B A vs. G All: C 15 108,990 0.275 (A) 0.425 (A) 1.13 (1.08-1.17) 0 (0-38) 4.48e-08
rs11654424 chr17:44950253 WNT9B A vs. G All: C 15 108,990 0.308 (A) 0.458 (G) 1.13 (1.08-1.17) 0 (0-37) 5.60e-08
rs1105127 chr17:44967722 WNT9B [+3626bp] C vs. G All: C 15 108,990 0.342 (C) 0.125 (C) 1.11 (1.07-1.15) 15 (0-53) 7.92e-09
rs12600562 chr17:44977040 WNT9B [+12944bp] G vs. T All: C 15 108,990 0.317 (G) 0.35 (T) 0.91 (0.88-0.94) 18 (0-55) 7.84e-08
rs1638446 chr17:44981466 RNU6ATAC3P [-17024bp] C vs. T All: C 15 108,990 0.242 (C) 0.45 (T) 0.91 (0.88-0.94) 6 (0-56) 1.02e-07