Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7590913 chr2:102305953 MAP4K4 [-7359bp] G vs. A All: C 15 108,990 0.375 (G) 0.492 (A) 1.08 (1.04-1.11) 30 (0-62) 1.25e-05
rs6730672 chr2:102306462 MAP4K4 [-6850bp] C vs. T All: C 15 108,990 - - 0.93 (0.90-0.96) 30 (0-62) 1.54e-05
rs6745389 chr2:102306675 MAP4K4 [-6637bp] G vs. A All: C 15 108,990 0.375 (G) 0.492 (A) 1.08 (1.04-1.11) 30 (0-62) 1.22e-05
rs35917598 chr2:102312403 MAP4K4 [-909bp] C vs. T All: C 15 108,990 0.367 (C) 0.467 (C) 1.08 (1.04-1.11) 29 (0-62) 1.21e-05
rs35510684 chr2:102315321 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.467 (T) 1.08 (1.04-1.11) 29 (0-62) 1.10e-05
rs34451091 chr2:102319730 MAP4K4 G vs. T All: C 15 108,990 0.383 (G) 0.492 (G) 1.08 (1.04-1.11) 29 (0-62) 1.13e-05
rs11674694 chr2:102325324 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.483 (T) 1.08 (1.04-1.11) 28 (0-61) 1.40e-05
rs62155719 chr2:102330311 MAP4K4 G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 29 (0-62) 1.18e-05
rs10432624 chr2:102331772 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.483 (T) 1.08 (1.04-1.11) 28 (0-61) 1.24e-05
rs6733355 chr2:102338377 MAP4K4 G vs. A All: C 15 108,990 0.383 (G) 0.458 (G) 1.08 (1.04-1.11) 27 (0-61) 1.16e-05
rs34979095 chr2:102344967 MAP4K4 C vs. T All: C 15 108,990 0.383 (C) 0.492 (C) 1.08 (1.04-1.12) 28 (0-62) 6.92e-06
rs12476979 chr2:102345345 MAP4K4 A vs. G All: C 14 106,157 0.383 (A) 0.492 (A) 1.08 (1.04-1.12) 29 (0-63) 8.14e-06
rs4527225 chr2:102349515 MAP4K4 G vs. T All: C 15 108,990 0.383 (G) 0.5 (G) 1.08 (1.04-1.11) 22 (0-58) 1.11e-05
rs7569049 chr2:102353345 MAP4K4 G vs. T All: C 15 108,990 0.375 (G) 0.467 (G) 1.07 (1.04-1.11) 29 (0-62) 2.43e-05
rs62155733 chr2:102370764 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.5 (T) 1.08 (1.04-1.11) 25 (0-60) 1.47e-05
rs71415327 chr2:102377069 MAP4K4 G vs. A All: C 15 108,990 0.392 (G) 0.483 (G) 1.08 (1.04-1.11) 27 (0-61) 1.45e-05
rs12476714 chr2:102378374 MAP4K4 G vs. A All: C 15 108,990 0.375 (G) 0.492 (G) 1.08 (1.04-1.11) 28 (0-61) 1.47e-05
rs13019379 chr2:102378535 MAP4K4 C vs. A All: C 15 108,990 0.392 (C) 0.492 (C) 1.08 (1.04-1.11) 29 (0-62) 1.50e-05
rs2068397 chr2:102378744 MAP4K4 A vs. C All: C 15 108,990 0.392 (A) 0.5 (A) 1.08 (1.04-1.11) 26 (0-60) 1.46e-05
rs4595997 chr2:102382499 MAP4K4 A vs. G All: C 15 108,990 0.375 (A) 0.483 (A) 1.08 (1.04-1.11) 27 (0-61) 1.10e-05
rs7569169 chr2:102389681 MAP4K4 G vs. A All: C 15 108,990 0.367 (G) 0.492 (G) 1.08 (1.04-1.11) 28 (0-61) 1.06e-05
rs35429183 chr2:102409288 MAP4K4 A vs. G All: C 15 108,990 0.383 (A) 0.492 (A) 1.08 (1.04-1.11) 22 (0-58) 1.05e-05
rs34043159 chr2:102413116 MAP4K4 C vs. T All: C 15 108,990 0.383 (C) 0.5 (C) 1.08 (1.04-1.12) 19 (0-55) 6.22e-06
rs6543097 chr2:102421721 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.5 (T) 1.08 (1.04-1.11) 28 (0-61) 1.10e-05
rs6732726 chr2:102421978 MAP4K4 C vs. T All: C 15 108,990 0.383 (C) 0.492 (C) 1.08 (1.04-1.11) 28 (0-61) 1.10e-05
rs11686650 chr2:102426591 MAP4K4 T vs. G All: C 15 108,990 0.392 (T) 0.492 (T) 1.08 (1.04-1.11) 21 (0-57) 1.65e-05
rs7564764 chr2:102427022 MAP4K4 T vs. C All: C 15 108,990 0.383 (T) 0.492 (T) 1.08 (1.04-1.11) 28 (0-61) 1.25e-05
rs13019066 chr2:102436119 MAP4K4 G vs. A All: C 15 108,990 0.392 (G) 0.483 (G) 1.08 (1.04-1.11) 26 (0-60) 1.01e-05
rs12469922 chr2:102437513 MAP4K4 G vs. A All: C 15 108,990 0.375 (G) 0.4 (A) 1.08 (1.04-1.12) 27 (0-61) 7.26e-06
rs2286240 chr2:102440166 MAP4K4 A vs. G All: C 15 108,990 0.383 (A) 0.492 (A) 1.08 (1.04-1.11) 27 (0-61) 1.09e-05
rs62305152 chr2:113371406 CHCHD5 [+24554bp] A vs. G All: C 15 108,990 - - 1.17 (1.10-1.25) 53 (16-74) 2.52e-06
rs75971673 chr2:126193505 intergenic G vs. A All: C 15 108,990 0.017 (G) 0.067 (G) 1.31 (1.12-1.53) 0 (0-50) 7.91e-04
rs111967545 chr2:126256749 intergenic G vs. A All: C 15 108,990 0.017 (G) 0.05 (G) 1.35 (1.15-1.58) 0 (0-52) 2.07e-04
rs76638943 chr2:126272031 intergenic G vs. A All: C 15 108,990 0.008 (G) 0.092 (G) 1.37 (1.17-1.61) 0 (0-53) 8.87e-05
rs60032637 chr2:126279884 intergenic A vs. G All: C 15 108,990 0.017 (A) 0.067 (A) 1.48 (1.22-1.78) 12 (0-50) 5.45e-05
rs61710256 chr2:126279937 intergenic C vs. A All: C 15 108,990 0.017 (C) 0.067 (C) 1.38 (1.18-1.62) 1 (0-54) 6.32e-05
rs118167691 chr2:126280137 intergenic A vs. G All: C 15 108,990 - 0.067 (G) 0.68 (0.56-0.82) 12 (0-50) 5.24e-05
rs114598144 chr2:126288330 intergenic A vs. G All: C 15 108,990 0.017 (A) - 1.39 (1.18-1.62) 2 (0-55) 5.49e-05
rs77508358 chr2:126296415 intergenic A vs. G All: C 15 108,990 0.017 (A) - 1.37 (1.17-1.61) 3 (0-55) 9.84e-05
rs11895856 chr2:126301495 intergenic T vs. C All: C 15 108,990 0.017 (T) 0.042 (T) 1.45 (1.22-1.72) 0 (0-51) 2.06e-05
rs78157643 chr2:126313781 intergenic T vs. G All: C 15 108,990 0.017 (T) 0.05 (T) 1.39 (1.18-1.63) 6 (0-57) 6.58e-05
rs76857553 chr2:126314058 intergenic G vs. A All: C 15 108,990 0.017 (G) - 1.39 (1.18-1.63) 6 (0-57) 6.54e-05
rs113602434 chr2:126314349 intergenic T vs. C All: C 15 108,990 0.025 (T) 0.05 (T) 1.39 (1.18-1.63) 6 (0-57) 6.49e-05
rs11902379 chr2:126316417 intergenic G vs. A All: C 15 108,990 - - 0.72 (0.61-0.85) 6 (0-57) 6.06e-05
rs111478744 chr2:126320083 intergenic A vs. G All: C 15 108,990 0.008 (A) 0.05 (A) 1.41 (1.20-1.67) 4 (0-56) 4.28e-05
rs113651137 chr2:126323022 intergenic C vs. A All: C 15 108,990 - 0.008 (A) 0.68 (0.58-0.81) 0 (0-53) 1.54e-05
rs62166632 chr2:134839924 MGAT5 [-37630bp] A vs. G All: C 15 108,990 0.158 (A) 0.275 (A) 1.10 (1.05-1.15) 0 (0-29) 4.07e-05
rs9287434 chr2:134853516 MGAT5 [-24038bp] G vs. A All: C 15 108,990 0.167 (G) 0.275 (G) 1.09 (1.04-1.14) 27 (0-60) 2.73e-04
rs74405316 chr2:134993498 MGAT5 T vs. C All: C 15 108,990 0.075 (T) - 0.88 (0.81-0.96) 15 (0-53) 0.003
rs111337576 chr2:135004470 MGAT5 G vs. A All: C 15 108,990 0.058 (G) - 0.87 (0.80-0.95) 12 (0-50) 0.002