Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12929797 chr16:52632944 intergenic T vs. C All: C 15 108,990 0.392 (T) 0.467 (T) 1.07 (1.03-1.10) 37 (0-66) 7.25e-05
rs3104778 chr16:52633652 intergenic G vs. A All: C 15 108,990 0.392 (G) 0.183 (A) 1.07 (1.04-1.10) 33 (0-64) 3.64e-05
rs3104779 chr16:52633657 intergenic G vs. A All: C 15 108,990 0.383 (G) 0.175 (A) 1.07 (1.04-1.10) 33 (0-64) 3.65e-05
rs3104780 chr16:52633914 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.183 (C) 1.07 (1.04-1.10) 33 (0-64) 4.12e-05
rs3104781 chr16:52634000 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.183 (C) 1.07 (1.03-1.10) 34 (0-64) 6.99e-05
rs3112613 chr16:52634163 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 32 (0-63) 7.71e-05
rs12922061 chr16:52635000 intergenic T vs. C All: C 15 108,990 0.208 (T) 0.283 (T) 1.09 (1.05-1.13) 32 (0-63) 1.21e-05
rs3112612 chr16:52635164 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 34 (0-64) 6.69e-05
rs3104783 chr16:52636242 intergenic A vs. C All: C 15 108,990 0.392 (A) 0.175 (C) 1.07 (1.04-1.10) 33 (0-64) 4.64e-05
rs3104784 chr16:52636365 intergenic C vs. A All: C 15 108,990 0.4 (C) 0.175 (A) 1.07 (1.03-1.10) 32 (0-63) 7.25e-05
rs3104786 chr16:52637363 intergenic G vs. A All: C 15 108,990 0.408 (G) 0.175 (A) 1.07 (1.03-1.10) 34 (0-64) 5.75e-05
rs4578643 chr16:52637435 intergenic T vs. G All: C 15 108,990 0.4 (T) 0.467 (T) 1.07 (1.03-1.10) 38 (0-67) 5.39e-05
rs3104787 chr16:52637543 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.03-1.10) 34 (0-65) 5.71e-05
rs3104788 chr16:52638503 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.04-1.10) 35 (0-65) 5.07e-05
rs3104789 chr16:52638548 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.04-1.10) 34 (0-64) 5.13e-05
rs3104790 chr16:52638663 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.175 (C) 1.07 (1.03-1.10) 35 (0-65) 5.43e-05
rs4290467 chr16:52638759 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.467 (G) 1.07 (1.03-1.10) 38 (0-67) 7.38e-05
rs3104791 chr16:52638962 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.175 (G) 1.07 (1.03-1.10) 34 (0-65) 5.77e-05
rs4238749 chr16:52639234 intergenic A vs. C All: C 15 108,990 0.4 (A) 0.467 (A) 1.07 (1.03-1.10) 37 (0-66) 7.47e-05
rs4238750 chr16:52639236 intergenic T vs. C All: C 15 108,990 0.4 (T) 0.467 (T) 1.07 (1.03-1.10) 37 (0-66) 7.44e-05
rs1112135 chr16:52639755 intergenic T vs. C All: C 15 108,990 0.392 (T) 0.467 (T) 1.07 (1.04-1.10) 39 (0-67) 5.93e-05
rs3104793 chr16:52641186 intergenic C vs. T All: C 15 108,990 0.4 (C) 0.175 (T) 1.07 (1.03-1.10) 32 (0-64) 7.21e-05
rs3104796 chr16:52642377 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.175 (A) 1.07 (1.03-1.11) 33 (0-64) 9.70e-05
rs3104797 chr16:52644450 intergenic C vs. A All: C 15 108,990 0.375 (C) 0.175 (A) 1.07 (1.04-1.11) 32 (0-64) 9.65e-05
rs3104800 chr16:52646376 intergenic A vs. G All: C 15 108,990 0.367 (A) 0.4 (G) 1.08 (1.04-1.12) 45 (0-70) 4.50e-05
rs3112611 chr16:52647170 intergenic T vs. G All: C 15 108,990 0.367 (T) 0.392 (G) 1.08 (1.04-1.12) 44 (0-70) 4.30e-05
rs3112610 chr16:52648554 intergenic A vs. G All: C 15 108,990 0.367 (A) 0.392 (G) 1.08 (1.04-1.12) 44 (0-70) 4.60e-05
rs3112606 chr16:52650909 intergenic C vs. T All: C 15 108,990 0.45 (C) 0.392 (T) 1.09 (1.05-1.14) 45 (0-70) 4.45e-05
rs2001579 chr16:54234158 intergenic G vs. A All: C 15 108,990 0.467 (G) 0.292 (A) 0.94 (0.91-0.97) 0 (-) 9.97e-05
rs12448908 chr16:54239870 intergenic C vs. T All: C 15 108,990 0.425 (C) 0.275 (T) 0.94 (0.91-0.97) 0 (-) 8.33e-05
rs9921416 chr16:54244754 intergenic T vs. C All: C 15 108,990 0.425 (T) 0.292 (C) 0.95 (0.92-0.98) 0 (-) 4.12e-04
rs72815259 chr16:54502704 intergenic C vs. A All: C 15 108,990 0.25 (C) 0.017 (G) 0.93 (0.89-0.96) 22 (0-58) 9.06e-05
rs56033824 chr16:54502860 intergenic A vs. G All: C 15 108,990 0.242 (A) 0.042 (A) 0.93 (0.89-0.96) 20 (0-57) 1.20e-04
rs4887855 chr16:76432398 CNTNAP4 T vs. C All: C 15 108,990 0.108 (T) 0.392 (T) 0.87 (0.81-0.93) 0 (0-40) 6.95e-05
rs4360964 chr16:76433088 CNTNAP4 G vs. A All: C 15 108,990 0.075 (G) 0.392 (G) 0.89 (0.84-0.95) 16 (0-54) 1.37e-04
rs34133162 chr16:89780672 VPS9D1 A vs. G All: C 14 105,041 0.158 (A) 0.033 (A) 1.15 (1.08-1.22) 0 (0-33) 1.51e-05
rs8054492 chr16:89802719 ZNF276 G vs. A All: C 15 108,990 - - 0.91 (0.87-0.96) 0 (0-44) 2.63e-04
rs12924101 chr16:89862906 FANCA C vs. A All: C 15 108,990 0.192 (C) 0.067 (C) 1.08 (1.03-1.13) 0 (0-48) 6.47e-04
rs11078677 chr17:7321858 NLGN2 T vs. C All: C 14 105,041 0.392 (T) 0.158 (T) 0.93 (0.90-0.96) 0 (0-36) 6.26e-05
rs60856990 chr17:7337853 TMEM102 [-909bp] G vs. A All: C 14 105,041 - - 1.08 (1.04-1.12) 0 (0-21) 1.21e-05
rs4151121 chr17:7342294 FGF11 G vs. A All: C 14 105,041 0.375 (G) - 0.93 (0.90-0.96) 0 (0-15) 1.63e-05
rs11869879 chr17:7342806 FGF11 T vs. C All: C 14 105,041 0.358 (T) - 0.93 (0.90-0.96) 0 (0-17) 2.08e-05
rs17856697 chr17:7348625 CHRNB1 G vs. A All: C 14 105,041 0.358 (G) - 0.93 (0.90-0.96) 0 (0-17) 3.96e-05
rs7215056 chr17:7350050 CHRNB1 A vs. C All: C 15 108,990 0.225 (A) - 1.08 (1.04-1.12) 46 (1-70) 1.44e-04
rs12451961 chr17:7351479 CHRNB1 A vs. G All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-45) 4.76e-06
rs72842824 chr17:7352910 CHRNB1 A vs. G All: C 15 108,990 0.233 (A) - 1.08 (1.04-1.12) 43 (0-69) 8.20e-05
rs67328311 chr17:7352976 CHRNB1 T vs. G All: C 15 108,990 0.392 (T) 0.267 (T) 1.09 (1.05-1.12) 0 (0-51) 1.34e-06
rs12600861 chr17:7355621 CHRNB1 A vs. C All: C 15 108,990 - - 0.92 (0.89-0.96) 0 (0-48) 4.10e-06
rs7210231 chr17:7357864 CHRNB1 A vs. C All: C 15 108,990 0.225 (A) 0.033 (A) 1.08 (1.04-1.12) 46 (1-70) 8.99e-05
rs2302761 chr17:7358520 CHRNB1 T vs. C All: C 15 108,990 0.225 (T) 0.033 (T) 1.08 (1.04-1.12) 46 (1-70) 9.01e-05