Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (IPDGC-deCODE) C UKPDSBB CL 604 (48%) 4916 (57%) 62 (12) - - - 80 (8) - 9,406

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56074046 chr17:7358930 CHRNB1 A vs. G All: C 15 108,990 0.358 (A) - 0.93 (0.90-0.97) 0 (0-32) 4.38e-05
rs9217 chr17:7363088 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.25 (C) 1.08 (1.05-1.12) 0 (0-52) 4.54e-06
rs34474914 chr17:7368242 ZBTB4 A vs. G All: C 15 108,990 - - 1.07 (1.03-1.10) 0 (0-34) 1.34e-04
rs55749333 chr17:7371932 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.267 (C) 1.08 (1.04-1.11) 0 (0-49) 1.39e-05
rs12942267 chr17:7372637 ZBTB4 T vs. C All: C 15 108,990 - - 0.93 (0.90-0.96) 1 (0-54) 1.96e-05
rs7209131 chr17:7376411 ZBTB4 C vs. T All: C 15 108,990 0.383 (C) 0.208 (C) 1.07 (1.04-1.11) 0 (0-48) 2.12e-05
rs55894190 chr17:7383238 ZBTB4 C vs. T All: C 15 108,990 0.425 (C) 0.308 (C) 1.07 (1.04-1.11) 0 (0-35) 3.10e-05
rs8076642 chr17:7383984 ZBTB4 G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-39) 2.76e-05
rs8081271 chr17:7384628 ZBTB4 A vs. G All: C 15 108,990 0.433 (A) 0.325 (A) 1.07 (1.04-1.11) 0 (0-40) 2.63e-05
rs11078680 chr17:7386428 ZBTB4 A vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 2.57e-05
rs2309751 chr17:7391524 POLR2A G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 1.78e-05
rs11651206 chr17:7392204 POLR2A A vs. C All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-38) 1.10e-05
rs11650977 chr17:7392341 POLR2A G vs. A All: C 15 108,990 0.425 (G) 0.325 (G) 1.07 (1.04-1.11) 0 (0-38) 1.79e-05
rs3853821 chr17:7396327 POLR2A G vs. T All: C 15 108,990 0.417 (G) 0.317 (G) 1.07 (1.04-1.11) 0 (0-35) 1.26e-05
rs7225954 chr17:7397274 POLR2A G vs. A All: C 15 108,990 0.425 (G) 0.333 (G) 1.07 (1.04-1.11) 0 (0-35) 2.20e-05
rs56226499 chr17:7398223 POLR2A C vs. T All: C 15 108,990 0.425 (C) 0.317 (C) 1.07 (1.04-1.11) 0 (0-33) 1.69e-05
rs11658168 chr17:7406134 POLR2A A vs. G All: C 15 108,990 0.383 (A) 0.25 (A) 1.08 (1.04-1.11) 0 (0-46) 1.11e-05
rs8080690 chr17:7409499 POLR2A T vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-31) 1.35e-05
rs11078685 chr17:7411447 POLR2A C vs. T All: C 15 108,990 0.425 (C) 0.317 (C) 1.08 (1.04-1.11) 0 (0-31) 1.04e-05
rs6761 chr17:7417663 POLR2A C vs. T All: C 15 108,990 0.408 (C) 0.483 (C) 1.08 (1.04-1.11) 0 (0-26) 7.94e-06
rs62059777 chr17:7419645 POLR2A [+1712bp] A vs. G All: C 15 108,990 0.208 (A) - 1.07 (1.03-1.12) 39 (0-67) 3.00e-04
rs11078687 chr17:7421672 POLR2A [+3739bp] G vs. A All: C 15 108,990 0.417 (G) 0.483 (G) 1.08 (1.04-1.11) 0 (0-24) 7.21e-06
rs11655920 chr17:7421696 POLR2A [+3763bp] T vs. C All: C 15 108,990 0.408 (T) 0.483 (T) 1.08 (1.04-1.11) 0 (0-24) 7.12e-06
rs11649768 chr17:7421871 POLR2A [+3938bp] A vs. G All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-24) 8.61e-06
rs8081619 chr17:7423766 POLR2A [+5833bp] T vs. C All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-25) 5.82e-06
rs10852890 chr17:7424747 POLR2A [+6814bp] A vs. G All: C 15 108,990 - 0.483 (G) 0.93 (0.90-0.96) 0 (0-28) 8.82e-06
rs11078692 chr17:7426065 POLR2A [+8132bp] C vs. T All: C 15 108,990 0.417 (C) 0.492 (T) 1.08 (1.05-1.12) 0 (0-25) 5.10e-06
rs60915639 chr17:7427568 POLR2A [+9635bp] G vs. T All: C 15 108,990 - - 0.93 (0.89-0.96) 0 (0-27) 5.55e-06
rs7218694 chr17:7429319 POLR2A [+11386bp] A vs. C All: C 15 108,990 0.392 (A) 0.483 (A) 1.08 (1.05-1.12) 0 (0-31) 2.76e-06
rs11658305 chr17:7429321 POLR2A [+11388bp] A vs. C All: C 15 108,990 0.4 (A) 0.483 (C) 1.09 (1.05-1.12) 0 (0-34) 2.48e-06
rs6503034 chr17:7430702 POLR2A [+12769bp] T vs. C All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-22) 2.94e-06
rs9899741 chr17:7431516 POLR2A [+13583bp] T vs. C All: C 15 108,990 - - 0.92 (0.89-0.96) 0 (0-25) 3.73e-06
rs9907045 chr17:7432369 POLR2A [+14436bp] C vs. T All: C 15 108,990 0.408 (C) 0.492 (C) 1.08 (1.05-1.12) 0 (0-24) 4.03e-06
rs7210659 chr17:7433459 POLR2A [+15526bp] G vs. A All: C 15 108,990 0.4 (G) 0.492 (G) 1.08 (1.05-1.12) 0 (0-23) 3.92e-06
rs8073584 chr17:7434818 POLR2A [+16885bp] G vs. T All: C 15 108,990 0.408 (G) 0.483 (T) 1.09 (1.06-1.13) 0 (0-18) 9.33e-07
rs8073937 chr17:7435040 POLR2A [+17107bp] A vs. G All: C 15 108,990 - - 0.92 (0.89-0.95) 0 (0-38) 1.84e-06
rs11654632 chr17:7437146 TNFSF12 [-15062bp] T vs. C All: C 15 108,990 - - 0.91 (0.88-0.95) 0 (0-12) 4.61e-07
rs11654638 chr17:7437181 TNFSF12 [-15027bp] C vs. T All: C 15 108,990 0.458 (C) 0.467 (T) 1.10 (1.06-1.14) 0 (0-19) 5.56e-07
rs62059792 chr17:7437665 TNFSF12 [-14543bp] G vs. A All: C 15 108,990 0.242 (G) 0.017 (G) 1.09 (1.05-1.14) 32 (0-63) 5.01e-05
rs7502669 chr17:7437958 TNFSF12 [-14250bp] G vs. A All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-32) 6.85e-05
rs6503037 chr17:7438050 TNFSF12 [-14158bp] G vs. A All: C 15 108,990 - - 1.09 (1.04-1.13) 0 (0-41) 5.87e-05
rs62059793 chr17:7438687 TNFSF12 [-13521bp] G vs. A All: C 15 108,990 0.233 (G) - 0.93 (0.89-0.97) 0 (0-50) 3.43e-04
rs112958256 chr17:7438864 TNFSF12 [-13344bp] C vs. T All: C 15 108,990 - - 0.90 (0.85-0.95) 6 (0-56) 5.93e-05
rs62059794 chr17:7439270 TNFSF12 [-12938bp] A vs. G All: C 15 108,990 0.1 (A) 0.025 (A) 1.11 (1.06-1.17) 1 (0-54) 5.60e-05
rs9900496 chr17:7439739 TNFSF12 [-12469bp] T vs. C All: C 15 108,990 - - 0.93 (0.90-0.97) 0 (0-37) 6.53e-05
rs75560110 chr17:7439841 TNFSF12 [-12367bp] T vs. C All: C 15 108,990 - - 0.90 (0.86-0.95) 0 (0-53) 6.49e-05
rs78009957 chr17:7440111 TNFSF12 [-12097bp] C vs. T All: C 15 108,990 0.125 (C) - 1.11 (1.05-1.17) 0 (0-53) 6.50e-05
rs72827540 chr17:7441757 TNFSF12 [-10451bp] A vs. G All: C 15 108,990 0.125 (A) 0.167 (A) 1.11 (1.05-1.17) 0 (0-53) 5.97e-05
rs60855753 chr17:7441776 TNFSF12 [-10432bp] T vs. G All: C 15 108,990 0.125 (T) 0.167 (T) 1.11 (1.05-1.17) 0 (0-53) 5.97e-05
rs61416196 chr17:7443740 TNFSF12 [-8468bp] G vs. A All: C 15 108,990 - - 0.90 (0.86-0.95) 0 (0-53) 6.25e-05