Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs666407 chr2:136640233 MCM6 [+6237bp] G vs. A All: C 15 108,990 0.183 (G) 0.392 (A) 0.91 (0.88-0.94) 0 (0-34) 5.08e-07
rs309125 chr2:136643555 MCM6 [+9559bp] T vs. C All: C 15 108,990 0.183 (T) 0.392 (C) 0.91 (0.87-0.94) 0 (0-33) 9.96e-08
rs218174 chr2:136658345 DARS [-5902bp] G vs. A All: C 15 108,990 0.175 (G) 0.383 (A) 0.91 (0.87-0.94) 0 (0-33) 2.83e-07
rs309168 chr2:136670298 DARS T vs. C All: C 15 108,990 0.175 (T) 0.392 (C) 0.91 (0.87-0.94) 0 (0-30) 2.36e-07
rs309160 chr2:136685228 DARS T vs. C All: C 15 108,990 0.175 (T) 0.392 (C) 0.91 (0.87-0.94) 0 (0-30) 2.27e-07
rs309164 chr2:136691825 DARS C vs. T All: C 15 108,990 0.175 (C) 0.45 (T) 0.91 (0.88-0.95) 0 (0-33) 1.74e-06
rs309145 chr2:136696138 DARS A vs. G All: C 15 108,990 - - 1.10 (1.06-1.15) 0 (0-30) 2.03e-07
rs309149 chr2:136698098 DARS C vs. T All: C 15 108,990 - - 1.10 (1.06-1.14) 0 (0-32) 2.10e-06
rs6754311 chr2:136707982 DARS C vs. T All: C 15 108,990 0.225 (C) 0.0 (T) 0.89 (0.86-0.93) 0 (0-39) 8.96e-09
rs12615624 chr2:136721603 DARS G vs. A All: C 15 108,990 0.175 (G) 0.442 (A) 0.91 (0.88-0.95) 0 (0-33) 1.19e-06
rs13404551 chr2:136721995 DARS C vs. T All: C 15 108,990 0.175 (C) 0.383 (T) 0.91 (0.87-0.94) 0 (0-28) 2.66e-07
rs687670 chr2:136740900 DARS C vs. T All: C 15 108,990 0.175 (C) 0.383 (T) 0.90 (0.87-0.94) 0 (0-33) 1.30e-07
rs309134 chr2:136755684 DARS [+12014bp] A vs. G All: C 15 108,990 0.175 (A) 0.442 (G) 0.90 (0.87-0.94) 0 (0-37) 4.19e-07
rs6714750 chr2:136783169 DARS [+39499bp] G vs. A All: C 15 108,990 0.175 (G) 0.433 (A) 0.90 (0.86-0.93) 0 (0-48) 2.48e-07
rs4954387 chr2:136784344 DARS [+40674bp] G vs. A All: C 15 108,990 0.208 (G) 0.375 (A) 0.90 (0.86-0.94) 0 (0-51) 1.39e-07
rs6716536 chr2:136787402 DARS [+43732bp] T vs. C All: C 15 108,990 0.208 (T) 0.383 (C) 0.90 (0.86-0.93) 0 (0-46) 1.34e-07
rs4954552 chr2:136789259 DARS [+45589bp] A vs. G All: C 15 108,990 0.233 (A) 0.0 (G) 0.91 (0.88-0.95) 18 (0-55) 2.29e-06
rs57243841 chr2:136796019 intergenic G vs. A All: C 15 108,990 0.158 (G) 0.375 (G) 0.91 (0.87-0.95) 15 (0-52) 7.70e-06
rs72974159 chr2:136800195 intergenic T vs. C All: C 15 108,990 0.167 (T) 0.342 (T) 0.91 (0.87-0.95) 19 (0-56) 1.09e-05
rs4954557 chr2:136805401 intergenic T vs. C All: C 15 108,990 0.192 (T) 0.292 (T) 0.92 (0.89-0.95) 16 (0-53) 9.19e-06
rs2090661 chr2:136806218 intergenic A vs. G All: C 15 108,990 - - 1.09 (1.05-1.13) 0 (0-54) 3.94e-06
rs7371606 chr2:136806774 intergenic G vs. A All: C 15 108,990 0.2 (G) 0.4 (A) 0.91 (0.88-0.95) 5 (0-56) 1.70e-06
rs80261410 chr2:136806996 intergenic C vs. T All: C 15 108,990 0.183 (C) 0.375 (C) 0.92 (0.88-0.95) 3 (0-55) 7.90e-06
rs4954388 chr2:136808142 intergenic C vs. T All: C 15 108,990 0.192 (C) 0.375 (C) 0.92 (0.88-0.95) 0 (0-53) 5.76e-06
rs11693502 chr2:136808949 intergenic C vs. T All: C 15 108,990 0.25 (C) 0.033 (T) 0.92 (0.88-0.95) 11 (0-49) 1.78e-06
rs13007153 chr2:136811263 intergenic C vs. T All: C 15 108,990 0.192 (C) 0.383 (C) 0.92 (0.89-0.95) 0 (0-53) 5.99e-06
rs11679933 chr2:136812931 intergenic G vs. T All: C 15 108,990 0.217 (G) 0.083 (T) 0.91 (0.88-0.95) 0 (0-44) 5.99e-07
rs1533649 chr2:136814109 intergenic A vs. G All: C 15 108,990 0.175 (A) 0.283 (A) 0.92 (0.88-0.95) 0 (0-54) 1.28e-05
rs1960171 chr2:136815388 intergenic T vs. C All: C 15 108,990 0.225 (T) 0.367 (T) 0.92 (0.89-0.95) 12 (0-50) 1.15e-05
rs749873 chr2:136817088 intergenic C vs. T All: C 15 108,990 0.258 (C) 0.025 (T) 0.91 (0.88-0.95) 0 (0-49) 3.83e-07
rs2011946 chr2:136817616 intergenic C vs. A All: C 15 108,990 0.225 (C) 0.075 (A) 0.92 (0.88-0.95) 0 (0-43) 6.20e-07
rs16832624 chr2:136817658 intergenic C vs. T All: C 15 108,990 0.175 (C) 0.3 (C) 0.92 (0.89-0.96) 0 (0-53) 1.29e-05
rs75128007 chr2:136817769 intergenic G vs. A All: C 15 108,990 0.183 (G) 0.292 (G) 0.92 (0.89-0.96) 0 (0-53) 1.36e-05
rs2011724 chr2:136818006 intergenic A vs. G All: C 15 108,990 0.258 (A) 0.025 (G) 0.91 (0.88-0.95) 0 (0-50) 4.03e-07
rs2090660 chr2:136818719 intergenic T vs. C All: C 15 108,990 0.183 (T) 0.292 (T) 0.92 (0.89-0.96) 0 (0-53) 1.36e-05
rs6704561 chr2:136819662 intergenic T vs. C All: C 15 108,990 0.217 (T) 0.075 (C) 0.91 (0.88-0.95) 0 (0-44) 1.11e-06
rs11681248 chr2:136820076 intergenic C vs. T All: C 15 108,990 0.275 (C) - 0.91 (0.88-0.94) 2 (0-55) 1.42e-07
rs4954558 chr2:136820854 intergenic G vs. A All: C 15 108,990 0.183 (G) 0.292 (G) 0.92 (0.88-0.96) 9 (0-46) 1.72e-05
rs11681659 chr2:136820960 intergenic C vs. T All: C 15 108,990 0.258 (C) - 0.91 (0.88-0.95) 0 (0-53) 5.05e-07
rs4954559 chr2:136822267 CXCR4 [-49652bp] G vs. A All: C 15 108,990 0.175 (G) 0.325 (G) 0.92 (0.88-0.95) 0 (0-51) 1.34e-05
rs28815269 chr2:136979530 intergenic G vs. A All: C 15 108,990 0.375 (G) - 0.93 (0.90-0.96) 2 (0-54) 4.24e-05
rs10165053 chr2:136981210 intergenic C vs. T All: C 15 108,990 - - 0.93 (0.90-0.96) 0 (0-51) 3.79e-05
rs11678502 chr2:136994454 intergenic C vs. T All: C 15 108,990 0.367 (C) 0.017 (T) 0.93 (0.90-0.96) 0 (0-51) 3.29e-05
rs12477034 chr2:136996822 intergenic G vs. A All: C 15 108,990 0.283 (G) 0.15 (A) 0.93 (0.90-0.96) 0 (0-48) 3.65e-05
rs13035055 chr2:136998064 intergenic C vs. T All: C 15 108,990 0.342 (C) 0.15 (T) 0.93 (0.90-0.96) 0 (0-47) 3.74e-05
rs4954585 chr2:136998394 intergenic C vs. T All: C 15 108,990 0.283 (C) 0.15 (T) 0.93 (0.90-0.96) 0 (0-47) 4.22e-05
rs4954587 chr2:136998609 intergenic G vs. A All: C 15 108,990 - - 1.08 (1.04-1.12) 0 (0-49) 2.70e-05
rs4954589 chr2:136998759 intergenic G vs. A All: C 15 108,990 0.283 (G) 0.133 (A) 0.93 (0.90-0.96) 0 (0-47) 4.21e-05
rs10200263 chr2:137007429 intergenic C vs. T All: C 15 108,990 0.358 (C) - 0.93 (0.90-0.97) 0 (0-49) 5.33e-05
rs13018756 chr2:137008235 intergenic C vs. T All: C 15 108,990 0.375 (C) - 0.93 (0.90-0.97) 0 (0-48) 7.30e-05