SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs113094545 chr1:66985172 SGIP1 [-13894bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs12048792 chr1:66960823 SGIP1 [-38243bp] C - 12 C vs. G 0.125 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs55771540 chr1:67202107 SGIP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs967324 chr1:67003569 SGIP1 C - 12 T vs. C 0.475 (C) 0.325 (C) >1 (-) 32 (-) >0.05
rs11208898 chr1:66992175 SGIP1 [-6891bp] C - 13 A vs. C 0.125 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs4655651 chr1:67153546 SGIP1 C - 13 T vs. C 0.233 (T) 0.233 (C) >1 (-) 0 (-) >0.05
rs678499 chr1:67190199 SGIP1 C - 13 A vs. G 0.15 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs12749728 chr1:66989380 SGIP1 [-9686bp] C - 13 A vs. G 0.15 (G) 0.467 (G) <1 (-) 0 (-) >0.05
rs72934143 chr1:66995864 SGIP1 [-3202bp] C - 13 A vs. C 0.133 (A) 0.3 (A) <1 (-) 28 (-) >0.05
rs7528959 chr1:66973083 SGIP1 [-25983bp] C - 13 C vs. G 0.492 (G) 0.367 (G) <1 (-) 30 (-) >0.05
rs77409356 chr1:67168412 SGIP1 C - 8 T vs. C - - <1 (-) 49 (-) >0.05
rs149245248 chr1:67209391 SGIP1 C - 11 T vs. G - - >1 (-) 3 (-) >0.05
rs6661841 chr1:66964000 SGIP1 [-35066bp] C - 13 T vs. C 0.492 (T) 0.358 (T) >1 (-) 36 (-) >0.05
rs17129039 chr1:66995895 SGIP1 [-3171bp] C - 13 A vs. C 0.133 (A) 0.308 (A) <1 (-) 28 (-) >0.05
rs17129041 chr1:66996037 SGIP1 [-3029bp] C - 13 T vs. C 0.133 (C) 0.308 (C) >1 (-) 28 (-) >0.05
rs510771 chr1:67178646 SGIP1 C - 13 A vs. C 0.15 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs17129043 chr1:66996088 SGIP1 [-2978bp] C - 13 A vs. G 0.133 (A) 0.308 (A) <1 (-) 28 (-) >0.05
rs72671619 chr1:67190070 SGIP1 C - 12 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs72934142 chr1:66995365 SGIP1 [-3701bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs6699123 chr1:66997508 SGIP1 [-1558bp] C - 13 A vs. G 0.133 (G) 0.317 (G) >1 (-) 28 (-) >0.05
rs1338203 chr1:66992613 SGIP1 [-6453bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs147649851 chr1:67096611 SGIP1 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs6665299 chr1:66994930 SGIP1 [-4136bp] C - 13 A vs. G 0.125 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs1338207 chr1:66994222 SGIP1 [-4844bp] C - 13 A vs. G 0.125 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs35334468 chr1:67098162 SGIP1 C - 12 A vs. G - - >1 (-) 17 (-) >0.05
rs6664942 chr1:66994749 SGIP1 [-4317bp] C - 13 T vs. C 0.125 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs34868698 chr1:67171980 SGIP1 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs9633417 chr1:67171412 SGIP1 C - 13 A vs. C 0.083 (A) 0.5 (A) >1 (-) 0 (-) >0.05
rs650202 chr1:67182563 SGIP1 C - 12 T vs. C 0.233 (C) 0.192 (T) <1 (-) 0 (-) >0.05
rs72934129 chr1:66993168 SGIP1 [-5898bp] C - 13 T vs. C 0.125 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs35393617 chr1:67167866 SGIP1 C - 13 A vs. T 0.083 (T) 0.5 (T) <1 (-) 0 (-) >0.05
rs12750223 chr1:67019819 SGIP1 C - 13 A vs. G 0.108 (G) 0.433 (G) <1 (-) 0 (-) >0.05
rs12022565 chr1:66992778 SGIP1 [-6288bp] C - 13 A vs. C 0.125 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs12040232 chr1:66992277 SGIP1 [-6789bp] C - 13 T vs. C 0.125 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs12755661 chr1:67039169 SGIP1 C - 12 T vs. G - - >1 (-) 10 (-) >0.05
rs7532613 chr1:66998667 SGIP1 [-399bp] C - 13 T vs. C 0.133 (T) 0.325 (T) <1 (-) 28 (-) >0.05
rs72934131 chr1:66993719 SGIP1 [-5347bp] C - 13 A vs. G 0.125 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs7544505 chr1:66998618 SGIP1 [-448bp] C - 13 T vs. C 0.125 (C) 0.317 (C) >1 (-) 25 (-) >0.05
rs12728269 chr1:67175438 SGIP1 C - 13 A vs. G 0.083 (A) 0.5 (A) >1 (-) 0 (-) >0.05
rs79024850 chr1:66993045 SGIP1 [-6021bp] C - 13 A vs. C 0.125 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs1338198 chr1:66991560 SGIP1 [-7506bp] C - 13 A vs. T 0.275 (A) 0.233 (T) >1 (-) 0 (-) >0.05
rs12724078 chr1:67167911 SGIP1 C - 13 T vs. G 0.083 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs7532598 chr1:66998624 SGIP1 [-442bp] C - 13 A vs. C 0.125 (A) 0.317 (A) <1 (-) 25 (-) >0.05
rs72677048 chr1:66977789 SGIP1 [-21277bp] C - 13 A vs. G 0.35 (A) - <1 (-) 24 (-) >0.05
rs34687266 chr1:67058906 SGIP1 C - 12 T vs. G - - >1 (-) 12 (-) >0.05
rs765685 chr1:66965475 SGIP1 [-33591bp] C - 13 A vs. G 0.492 (A) 0.367 (A) >1 (-) 35 (-) >0.05
rs140741203 chr1:67173539 SGIP1 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs34093441 chr1:67165722 SGIP1 C - 13 A vs. G 0.083 (G) 0.5 (G) <1 (-) 0 (-) >0.05
rs17129332 chr1:67158014 SGIP1 C - 13 C vs. G 0.083 (G) 0.5 (G) <1 (-) 0 (-) >0.05
rs58390524 chr1:66964609 SGIP1 [-34457bp] C - 13 T vs. C 0.492 (C) 0.367 (C) <1 (-) 37 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.