SGIP1, chr1:66999066-67213982 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141167995 chr1:66978205 SGIP1 [-20861bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs11208947 chr1:67155464 SGIP1 C - 13 A vs. G 0.333 (G) 0.167 (G) >1 (-) 6 (-) <0.05
rs11208951 chr1:67188107 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 30 (-) <0.05
rs1498354 chr1:67180489 SGIP1 C - 13 A vs. T 0.35 (A) 0.192 (A) <1 (-) 33 (-) <0.05
rs10889649 chr1:67178005 SGIP1 C - 13 A vs. G 0.35 (A) 0.183 (A) <1 (-) 33 (-) <0.05
rs1547644 chr1:67175557 SGIP1 C - 13 A vs. G 0.342 (G) 0.192 (G) >1 (-) 33 (-) <0.05
rs3738167 chr1:67171266 SGIP1 C - 13 T vs. G 0.35 (T) 0.183 (T) <1 (-) 34 (-) <0.05
rs7512401 chr1:67157448 SGIP1 C - 13 A vs. G 0.35 (A) 0.183 (A) <1 (-) 26 (-) <0.05
rs11208948 chr1:67158668 SGIP1 C - 13 A vs. G 0.35 (A) 0.175 (A) <1 (-) 27 (-) <0.05
rs16844 chr1:67160884 SGIP1 C - 13 A vs. G 0.35 (G) 0.183 (G) >1 (-) 29 (-) <0.05
rs6659325 chr1:67163778 SGIP1 C - 13 T vs. C 0.35 (T) 0.183 (T) <1 (-) 32 (-) <0.05
rs10789216 chr1:67155568 SGIP1 C - 13 T vs. C 0.342 (C) 0.183 (C) >1 (-) 26 (-) <0.05
rs2181625 chr1:67192271 SGIP1 C - 13 A vs. G 0.342 (G) 0.15 (G) >1 (-) 31 (-) <0.05
rs12063436 chr1:67165998 SGIP1 C - 13 C vs. G - - <1 (-) 32 (-) <0.05
rs532564 chr1:67223503 TCTEX1D1 C - 13 A vs. G 0.425 (A) - >1 (-) 0 (-) <0.05
rs2312589 chr1:67258784 INSL5 [-4640bp] C - 12 A vs. G 0.1 (A) 0.175 (A) >1 (-) 0 (-) <0.05
rs688630 chr1:67222966 TCTEX1D1 C - 13 A vs. G 0.433 (G) - <1 (-) 0 (-) <0.05
rs113730648 chr1:67260318 INSL5 [-3106bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs1280310 chr1:67216823 TCTEX1D1 [-1319bp] C - 13 A vs. T 0.392 (A) - >1 (-) 0 (-) <0.05
rs672230 chr1:67224330 TCTEX1D1 C - 13 T vs. C 0.425 (C) - <1 (-) 0 (-) <0.05
rs2916 chr1:67216697 TCTEX1D1 [-1445bp] C - 13 A vs. G 0.392 (A) - >1 (-) 0 (-) <0.05
rs536527 chr1:67193793 SGIP1 C - 13 T vs. G 0.408 (T) - >1 (-) 0 (-) <0.05
rs10889648 chr1:67168182 SGIP1 C - 13 T vs. C 0.433 (C) 0.317 (T) >1 (-) 9 (-) <0.05
rs515944 chr1:67219980 TCTEX1D1 C - 13 A vs. C 0.375 (A) - >1 (-) 0 (-) <0.05
rs2483704 chr1:67195353 SGIP1 C - 12 A vs. G 0.408 (A) - >1 (-) 0 (-) <0.05
rs4488004 chr1:67073314 SGIP1 C - 13 T vs. C 0.467 (C) 0.475 (T) >1 (-) 10 (-) <0.05
rs539014 chr1:67211887 SGIP1 C - 13 A vs. G 0.4 (A) - >1 (-) 0 (-) <0.05
rs6680364 chr1:67104834 SGIP1 C - 13 A vs. G 0.467 (A) 0.5 (A) <1 (-) 11 (-) <0.05
rs12138066 chr1:67103816 SGIP1 C - 13 T vs. C 0.467 (T) 0.5 (T) <1 (-) 11 (-) <0.05
rs2312154 chr1:67072976 SGIP1 C - 13 A vs. G 0.467 (G) 0.492 (G) >1 (-) 11 (-) <0.05
rs11208920 chr1:67075312 SGIP1 C - 13 A vs. C 0.458 (A) 0.492 (A) <1 (-) 10 (-) <0.05
rs628655 chr1:67213573 SGIP1 C - 13 T vs. G 0.4 (G) - <1 (-) 0 (-) <0.05
rs7546825 chr1:67101802 SGIP1 C - 13 A vs. G 0.458 (G) 0.5 (G) >1 (-) 12 (-) <0.05
rs6679568 chr1:67074177 SGIP1 C - 13 T vs. C 0.467 (T) 0.492 (T) <1 (-) 12 (-) <0.05
rs544258 chr1:67219209 TCTEX1D1 C - 13 T vs. C 0.392 (C) - <1 (-) 0 (-) <0.05
rs1032634 chr1:67195192 SGIP1 C - 13 C vs. G 0.408 (G) - <1 (-) 5 (-) <0.05
rs1032635 chr1:67195184 SGIP1 C - 13 C vs. G 0.408 (G) - <1 (-) 7 (-) <0.05
rs481681 chr1:67194378 SGIP1 C - 13 A vs. G 0.4 (A) - >1 (-) 0 (-) <0.05
rs2031477 chr1:67158874 SGIP1 C - 13 A vs. T 0.425 (T) 0.317 (A) >1 (-) 10 (-) <0.05
rs6668681 chr1:67171527 SGIP1 C - 13 T vs. G - - <1 (-) 14 (-) <0.05
rs1325266 chr1:67160602 SGIP1 C - 13 A vs. G 0.433 (G) 0.317 (A) >1 (-) 10 (-) <0.05
rs485543 chr1:67194372 SGIP1 C - 13 T vs. C 0.4 (T) - >1 (-) 0 (-) <0.05
rs10493414 chr1:67161716 SGIP1 C - 13 A vs. T 0.433 (A) 0.317 (T) <1 (-) 11 (-) <0.05
rs12117649 chr1:67168606 SGIP1 C - 13 A vs. G 0.433 (A) 0.317 (G) <1 (-) 14 (-) <0.05
rs1325265 chr1:67158367 SGIP1 C - 13 T vs. C 0.408 (T) 0.317 (C) <1 (-) 11 (-) <0.05
rs4143025 chr1:67167548 SGIP1 C - 13 T vs. C 0.433 (T) 0.308 (C) <1 (-) 14 (-) <0.05
rs7528182 chr1:67067369 SGIP1 C - 13 T vs. C 0.45 (T) 0.483 (C) <1 (-) 11 (-) <0.05
rs6686476 chr1:67164177 SGIP1 C - 13 A vs. T - - >1 (-) 13 (-) <0.05
rs12119578 chr1:67200250 SGIP1 C - 13 T vs. C - - <1 (-) 24 (-) <0.05
rs2146905 chr1:67166893 SGIP1 C - 13 A vs. C 0.408 (C) 0.317 (A) >1 (-) 14 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.