ABCB9, chr12:123405498-123466196 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7953894 chr12:123404966 ABCB9 [-532bp] All: C 105,041 14 A vs. C 0.5 (A) 0.283 (C) 1.09 (1.06-1.12) 37 (0-67) 1.33e-07
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7953894 chr12:123404966 ABCB9 [-532bp] All: C 105,041 14 A vs. C 0.5 (A) 0.283 (C) 1.09 (1.06-1.12) 37 (0-67) 1.33e-07
rs4148866 chr12:123425575 ABCB9 All: C 105,041 14 T vs. C 0.383 (T) 0.358 (C) 1.08 (1.05-1.12) 36 (0-66) 2.34e-06
rs11060853 chr12:123424071 ABCB9 All: C 105,041 14 G vs. A 0.383 (G) 0.342 (A) 1.08 (1.05-1.12) 36 (0-66) 2.39e-06
rs3897102 chr12:123492112 PITPNM2 All: C 108,990 15 T vs. C 0.408 (T) 0.383 (C) 1.08 (1.04-1.12) 26 (0-60) 7.38e-06
rs11609798 chr12:123409694 ABCB9 C - 12 C vs. G 0.392 (C) 0.417 (G) >1 (-) 42 (-) <0.05
rs142514180 chr12:123418656 ABCB9 C - 4 T vs. G - - >1 (-) 0 (-) <0.05
rs73411050 chr12:123510303 PITPNM2 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs11060703 chr12:123396561 ABCB9 [-8937bp] All: C 108,990 15 G vs. A 0.058 (G) - 1.06 (0.97-1.16) 14 (0-52) 0.173
rs7959441 chr12:123363825 VPS37B C - 13 T vs. C 0.117 (C) 0.208 (C) >1 (-) 0 (-) >0.05
rs149394768 chr12:123476791 PITPNM2 C - 12 A vs. G - - >1 (-) 52 (-) >0.05
rs7139055 chr12:123364198 VPS37B C - 13 T vs. C 0.117 (C) 0.208 (C) >1 (-) 0 (-) >0.05
rs4080877 chr12:123413311 ABCB9 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs3852537 chr12:123361501 VPS37B C - 13 T vs. C 0.117 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs10744434 chr12:123368419 VPS37B C - 13 A vs. T 0.117 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs4759386 chr12:123377470 VPS37B C - 13 T vs. C - 0.217 (T) <1 (-) 0 (-) >0.05
rs4759387 chr12:123377569 VPS37B C - 13 T vs. C 0.117 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs7980541 chr12:123379477 VPS37B C - 13 T vs. C 0.133 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs12828755 chr12:123470586 PITPNM2 C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs78462864 chr12:123365867 VPS37B C - 13 T vs. C 0.025 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs4759356 chr12:123382646 VPS37B [+1655bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6489247 chr12:123385443 VPS37B [+4452bp] C - 13 T vs. C 0.075 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs937564 chr12:123477311 PITPNM2 C - 13 T vs. C 0.2 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs883263 chr12:123485188 PITPNM2 C - 13 A vs. G 0.192 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs1463877 chr12:123473254 PITPNM2 C - 13 T vs. C 0.2 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs12811109 chr12:123471094 PITPNM2 C - 13 A vs. G 0.192 (A) - <1 (-) 0 (-) >0.05
rs4275659 chr12:123447928 ABCB9 C - 13 T vs. C 0.292 (T) 0.375 (T) <1 (-) 9 (-) >0.05
rs149850639 chr12:123468546 PITPNM2 C - 12 T vs. C - - <1 (-) 52 (-) >0.05
rs111835289 chr12:123438917 ABCB9 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs61955196 chr12:123451018 ABCB9 C - 13 C vs. G 0.292 (G) 0.375 (G) >1 (-) 7 (-) >0.05
rs11061166 chr12:123469907 PITPNM2 C - 12 T vs. C - - >1 (-) 51 (-) >0.05
rs883563 chr12:123460823 ABCB9 C - 13 A vs. G 0.217 (A) 0.175 (A) <1 (-) 13 (-) >0.05
rs12425009 chr12:123502044 PITPNM2 C - 13 T vs. C 0.3 (C) 0.383 (C) >1 (-) 7 (-) >0.05
rs117051159 chr12:123482506 PITPNM2 C - 12 T vs. C 0.008 (T) - >1 (-) 57 (-) >0.05
rs7296418 chr12:123457619 ABCB9 C - 13 T vs. C 0.3 (C) 0.383 (C) >1 (-) 6 (-) >0.05
rs7305511 chr12:123498253 PITPNM2 C - 13 T vs. G 0.3 (G) 0.383 (G) >1 (-) 8 (-) >0.05
rs12425850 chr12:123501972 PITPNM2 C - 13 T vs. C 0.292 (T) 0.383 (T) <1 (-) 8 (-) >0.05
rs4148856 chr12:123450765 ABCB9 C - 13 C vs. G 0.208 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs883562 chr12:123460719 ABCB9 C - 13 C vs. G 0.3 (C) 0.383 (C) <1 (-) 9 (-) >0.05
rs4759385 chr12:123370466 VPS37B C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3759115 chr12:123464279 ABCB9 C - 13 T vs. C 0.292 (T) 0.383 (T) <1 (-) 9 (-) >0.05
rs55742290 chr12:123466111 ABCB9 C - 13 T vs. C 0.292 (C) 0.375 (C) >1 (-) 9 (-) >0.05
rs884956 chr12:123460962 ABCB9 C - 13 T vs. C 0.292 (T) 0.383 (T) <1 (-) 9 (-) >0.05
rs3741530 chr12:123469647 PITPNM2 C - 13 T vs. G 0.275 (G) 0.408 (G) >1 (-) 10 (-) >0.05
rs151020115 chr12:123441556 ABCB9 C - 7 A vs. C - - <1 (-) 0 (-) >0.05
rs7135296 chr12:123476586 PITPNM2 C - 13 A vs. G 0.283 (G) 0.383 (G) >1 (-) 11 (-) >0.05
rs1984658 chr12:123483426 PITPNM2 C - 13 A vs. G - - >1 (-) 11 (-) >0.05
rs4534620 chr12:123409168 ABCB9 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs56392140 chr12:123408116 ABCB9 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs59187995 chr12:123407823 ABCB9 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs73408823 chr12:123404827 ABCB9 [-671bp] C - 3 T vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]