ALK, chr2:29415640-30144432 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12434584 chr2:29918951 ALK All: C 105,041 14 C vs. T - - 1.07 (1.04-1.11) 0 (0-47) 7.52e-05
Meta_image?name=rs12434584

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs55757927 chr2:30064378 ALK C - 13 C vs. G 0.158 (C) 0.125 (C) >1 (-) 23 (-) >0.05
rs6753532 chr2:30086670 ALK C - 13 T vs. C 0.15 (C) 0.158 (C) <1 (-) 41 (-) >0.05
rs112714938 chr2:29817090 ALK C - 12 T vs. C - - >1 (-) 37 (-) >0.05
rs74762995 chr2:30178351 ALK [+33919bp] C - 8 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs1534546 chr2:29551961 ALK C - 13 A vs. G 0.383 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs13399652 chr2:29873085 ALK C - 11 C vs. G - - <1 (-) 39 (-) >0.05
rs34308966 chr2:29572537 ALK C - 13 T vs. C 0.45 (T) 0.242 (C) <1 (-) 0 (-) >0.05
rs13410003 chr2:29872844 ALK C - 11 A vs. G - - <1 (-) 39 (-) >0.05
rs3213947 chr2:29366830 CLIP4 C - 13 A vs. G 0.417 (G) 0.342 (A) >1 (-) 0 (-) >0.05
rs2290364 chr2:29413761 CLIP4 [+1252bp] C - 13 C vs. G 0.45 (G) 0.283 (C) >1 (-) 0 (-) >0.05
rs75311011 chr2:29873360 ALK C - 11 T vs. C - - >1 (-) 39 (-) >0.05
rs76155026 chr2:29873268 ALK C - 11 T vs. G - - <1 (-) 39 (-) >0.05
rs79226984 chr2:29873109 ALK C - 11 T vs. C - - <1 (-) 39 (-) >0.05
rs12465220 chr2:29559519 ALK C - 13 T vs. C 0.458 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs4128317 chr2:29659854 ALK C - 13 A vs. C 0.4 (C) - <1 (-) 0 (-) >0.05
rs72792447 chr2:29626802 ALK C - 13 T vs. C 0.242 (T) - >1 (-) 0 (-) >0.05
rs12988840 chr2:29787537 ALK C - 13 A vs. G 0.3 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs6732925 chr2:29494740 ALK C - 13 T vs. C 0.025 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs3112923 chr2:29396355 CLIP4 C - 13 T vs. G 0.2 (T) - >1 (-) 61 (-) >0.05
rs4638747 chr2:29478573 ALK C - 9 A vs. C 0.025 (A) - >1 (-) 4 (-) >0.05
rs13013613 chr2:29554958 ALK C - 13 T vs. C - - <1 (-) 9 (-) >0.05
rs143221021 chr2:29881932 ALK C - 10 A vs. G - - <1 (-) 40 (-) >0.05
rs6749082 chr2:30115527 ALK C - 13 C vs. G 0.258 (C) 0.175 (C) >1 (-) 18 (-) >0.05
rs10865515 chr2:30087216 ALK C - 13 T vs. C 0.158 (C) 0.158 (C) <1 (-) 42 (-) >0.05
rs145893552 chr2:29876691 ALK C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs10192789 chr2:29368617 CLIP4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7587031 chr2:29496549 ALK C - 13 A vs. G 0.033 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs80050069 chr2:30107921 ALK C - 13 A vs. G 0.133 (A) - >1 (-) 6 (-) >0.05
rs6729436 chr2:29578564 ALK C - 13 A vs. T 0.442 (A) 0.242 (T) <1 (-) 0 (-) >0.05
rs111646461 chr2:29814551 ALK C - 12 T vs. C - - >1 (-) 39 (-) >0.05
rs2339470 chr2:29497276 ALK C - 13 A vs. C 0.042 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs4520995 chr2:30118386 ALK C - 13 T vs. C 0.267 (T) 0.183 (T) >1 (-) 17 (-) >0.05
rs147536458 chr2:29814973 ALK C - 12 T vs. C - - <1 (-) 39 (-) >0.05
rs142228808 chr2:30084652 ALK C - 5 C vs. G - - >1 (-) 0 (-) >0.05
rs139723898 chr2:29834666 ALK C - 10 T vs. C - - <1 (-) 39 (-) >0.05
rs6709279 chr2:29417782 ALK C - 13 T vs. C 0.442 (T) 0.283 (C) <1 (-) 0 (-) >0.05
rs13000043 chr2:29569562 ALK C - 13 T vs. C 0.183 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs4618000 chr2:30145427 ALK [+995bp] C - 13 T vs. C 0.417 (T) 0.425 (C) <1 (-) 44 (-) >0.05
rs6727501 chr2:30087069 ALK C - 13 C vs. G 0.15 (G) 0.158 (G) <1 (-) 42 (-) >0.05
rs77192068 chr2:29373865 CLIP4 C - 13 A vs. G 0.083 (A) - <1 (-) 9 (-) >0.05
rs79797728 chr2:29367121 CLIP4 C - 13 T vs. C 0.067 (T) - <1 (-) 0 (-) >0.05
rs10188439 chr2:29625754 ALK C - 13 C vs. G 0.408 (G) 0.042 (G) <1 (-) 0 (-) >0.05
rs4280416 chr2:30088023 ALK C - 13 T vs. C 0.15 (C) 0.125 (C) <1 (-) 41 (-) >0.05
rs146338269 chr2:30014343 ALK C - 13 T vs. C - - >1 (-) 37 (-) >0.05
rs4589708 chr2:29498210 ALK C - 13 A vs. G 0.025 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs66831303 chr2:29680523 ALK C - 13 T vs. C 0.133 (C) 0.358 (C) >1 (-) 0 (-) >0.05
rs6749171 chr2:29498907 ALK C - 13 T vs. G 0.025 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs11127242 chr2:30087537 ALK C - 13 T vs. G 0.158 (G) 0.133 (G) <1 (-) 42 (-) >0.05
rs1670284 chr2:29419591 ALK C - 13 T vs. G 0.458 (G) 0.275 (T) >1 (-) 0 (-) >0.05
rs74545623 chr2:30141474 ALK C - 10 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]