CLIP4, chr2:29320571-29412509 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138012989 chr2:29283252 FAM179A C - 10 C vs. G - - <1 (-) 48 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138012989 chr2:29283252 FAM179A C - 10 C vs. G - - <1 (-) 48 (-) <0.05
rs72852026 chr2:29441826 ALK C - 4 A vs. C - - >1 (-) 0 (-) <0.05
rs72852027 chr2:29441954 ALK C - 4 T vs. C - - >1 (-) 0 (-) <0.05
rs72852028 chr2:29442807 ALK C - 4 A vs. G - - >1 (-) 0 (-) <0.05
rs76002034 chr2:29445157 ALK C - 12 C vs. G 0.033 (C) - <1 (-) 8 (-) <0.05
rs2293563 chr2:29449819 ALK C - 13 T vs. C 0.2 (T) 0.1 (T) >1 (-) 0 (-) <0.05
rs7608461 chr2:29275685 FAM179A C - 13 T vs. C 0.183 (T) 0.308 (C) <1 (-) 0 (-) <0.05
rs115416410 chr2:29402511 CLIP4 C - 13 A vs. G 0.033 (A) - >1 (-) 29 (-) <0.05
rs116197204 chr2:29458983 ALK C - 3 T vs. C 0.025 (T) - <1 (-) 0 (-) <0.05
rs142332542 chr2:29435274 ALK C - 5 T vs. C - - >1 (-) 0 (-) <0.05
rs72852019 chr2:29436464 ALK C - 3 T vs. C - - <1 (-) 0 (-) <0.05
rs1317902 chr2:29449005 ALK C - 13 T vs. G 0.158 (T) 0.1 (T) >1 (-) 0 (-) <0.05
rs142579706 chr2:29423028 ALK C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs140223568 chr2:29391630 CLIP4 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs76939846 chr2:29408481 CLIP4 C - 13 T vs. G 0.092 (T) - <1 (-) 0 (-) <0.05
rs1728827 chr2:29435897 ALK C - 13 A vs. C 0.417 (C) 0.108 (C) <1 (-) 22 (-) <0.05
rs77216900 chr2:29427777 ALK C - 13 T vs. C 0.033 (C) - >1 (-) 0 (-) <0.05
rs116692839 chr2:29430910 ALK C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) <0.05
rs141534316 chr2:29412138 CLIP4 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs2339376 chr2:29398788 CLIP4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs77302120 chr2:29405743 CLIP4 C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs114315183 chr2:29460848 ALK C - 9 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs3099569 chr2:29365040 CLIP4 C - 13 A vs. G 0.208 (A) 0.083 (A) >1 (-) 54 (-) >0.05
rs1470842 chr2:29375079 CLIP4 C - 13 A vs. G 0.2 (A) 0.017 (A) >1 (-) 58 (-) >0.05
rs2879455 chr2:29401544 CLIP4 C - 13 T vs. C 0.408 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs3100246 chr2:29383256 CLIP4 C - 13 T vs. G 0.175 (T) - >1 (-) 59 (-) >0.05
rs143141008 chr2:29304664 C2orf71 [+7537bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs3100233 chr2:29373632 CLIP4 C - 13 A vs. C 0.183 (A) 0.017 (A) >1 (-) 59 (-) >0.05
rs7587574 chr2:29412717 CLIP4 [+208bp] C - 13 C vs. G 0.4 (C) 0.258 (G) <1 (-) 0 (-) >0.05
rs4666170 chr2:29381291 CLIP4 C - 13 A vs. G 0.433 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs6725205 chr2:29377791 CLIP4 C - 13 A vs. G 0.417 (G) 0.333 (A) >1 (-) 0 (-) >0.05
rs6725323 chr2:29377923 CLIP4 C - 13 A vs. T 0.4 (T) 0.325 (A) >1 (-) 0 (-) >0.05
rs3100238 chr2:29375828 CLIP4 C - 13 T vs. C 0.2 (C) 0.017 (C) <1 (-) 60 (-) >0.05
rs7576145 chr2:29409548 CLIP4 C - 9 T vs. G 0.008 (T) - >1 (-) 12 (-) >0.05
rs3100222 chr2:29362116 CLIP4 C - 13 A vs. G 0.208 (A) - >1 (-) 52 (-) >0.05
rs3099565 chr2:29362132 CLIP4 C - 13 A vs. C 0.208 (A) 0.083 (A) >1 (-) 49 (-) >0.05
rs13417374 chr2:29388807 CLIP4 C - 13 A vs. G 0.417 (G) 0.2 (A) >1 (-) 0 (-) >0.05
rs3099568 chr2:29364516 CLIP4 C - 13 T vs. C 0.208 (T) 0.017 (T) >1 (-) 53 (-) >0.05
rs6547905 chr2:29272451 FAM179A C - 13 A vs. C 0.3 (A) - >1 (-) 52 (-) >0.05
rs12714256 chr2:29273568 FAM179A C - 13 T vs. C 0.3 (T) - >1 (-) 52 (-) >0.05
rs1670282 chr2:29411696 CLIP4 C - 13 A vs. G 0.092 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs12714255 chr2:29273137 FAM179A C - 13 T vs. C 0.3 (C) - <1 (-) 52 (-) >0.05
rs2290366 chr2:29414571 ALK [-1069bp] C - 13 A vs. G 0.4 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs72861052 chr2:29293446 C2orf71 C - 12 A vs. G - - >1 (-) 23 (-) >0.05
rs4666167 chr2:29355303 CLIP4 C - 13 T vs. C 0.208 (C) 0.083 (C) <1 (-) 48 (-) >0.05
rs2060906 chr2:29382256 CLIP4 C - 13 T vs. C 0.2 (C) 0.017 (C) <1 (-) 61 (-) >0.05
rs4666168 chr2:29355345 CLIP4 C - 13 T vs. C 0.208 (T) 0.075 (T) >1 (-) 48 (-) >0.05
rs13383607 chr2:29407773 CLIP4 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs10190155 chr2:29302115 C2orf71 [+4988bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs1452920 chr2:29345180 CLIP4 C - 13 T vs. C 0.442 (C) 0.492 (T) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.