ATPAF2, chr17:17880723-17942523 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12952818 chr17:17988591 DRG2 [-2609bp] All: C 108,990 15 A vs. G - - 1.08 (1.05-1.12) 12 (0-50) 2.54e-06
Meta_image?name=rs12952818

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12952818 chr17:17988591 DRG2 [-2609bp] All: C 108,990 15 A vs. G - - 1.08 (1.05-1.12) 12 (0-50) 2.54e-06
rs12943914 chr17:17980671 GID4 [+8953bp] All: C 108,990 15 G vs. A 0.35 (G) 0.042 (A) 0.93 (0.90-0.96) 17 (0-54) 2.98e-06
rs72827413 chr17:17988299 DRG2 [-2901bp] All: C 108,990 15 C vs. T 0.342 (C) 0.042 (T) 0.93 (0.90-0.96) 16 (0-54) 3.28e-06
rs2955360 chr17:17974887 GID4 [+3169bp] All: C 108,990 15 G vs. A 0.333 (G) 0.042 (A) 0.93 (0.90-0.96) 23 (0-58) 5.55e-06
rs2955382 chr17:17947710 GID4 All: C 108,990 15 C vs. T 0.333 (C) 0.033 (T) 0.93 (0.90-0.96) 8 (0-44) 3.96e-05
rs6502637 chr17:17986098 DRG2 [-5102bp] All: C 108,990 15 G vs. A 0.258 (G) 0.375 (A) 0.93 (0.90-0.96) 31 (0-63) 4.13e-05
rs7212447 chr17:17987067 DRG2 [-4133bp] All: C 108,990 15 A vs. G 0.258 (A) 0.375 (G) 0.93 (0.90-0.96) 31 (0-63) 4.18e-05
rs4365346 chr17:17989373 DRG2 [-1827bp] All: C 108,990 15 T vs. G 0.258 (T) 0.375 (G) 0.93 (0.90-0.96) 30 (0-62) 4.52e-05
rs4561528 chr17:17979099 GID4 [+7381bp] All: C 108,990 15 T vs. C 0.25 (T) - 0.93 (0.90-0.96) 28 (0-61) 5.05e-05
rs4506967 chr17:17990474 DRG2 [-726bp] All: C 108,990 15 C vs. A 0.267 (C) 0.383 (A) 0.93 (0.90-0.96) 30 (0-63) 5.12e-05
rs8066764 chr17:17974668 GID4 [+2950bp] All: C 108,990 15 T vs. C 0.258 (T) 0.4 (C) 0.93 (0.90-0.96) 36 (0-66) 5.37e-05
rs11078410 chr17:17990634 DRG2 [-566bp] All: C 108,990 15 T vs. C - - 1.07 (1.04-1.11) 27 (0-60) 5.69e-05
rs9303144 chr17:17977355 GID4 [+5637bp] All: C 108,990 15 C vs. T 0.258 (C) 0.258 (T) 0.93 (0.90-0.96) 31 (0-63) 5.69e-05
rs62073573 chr17:17976354 GID4 [+4636bp] All: C 108,990 15 A vs. G 0.258 (A) - 0.93 (0.90-0.96) 32 (0-64) 5.80e-05
rs59518074 chr17:17984162 DRG2 [-7038bp] All: C 108,990 15 A vs. G - - 1.08 (1.04-1.12) 23 (0-59) 5.97e-05
rs4426402 chr17:17977926 GID4 [+6208bp] All: C 108,990 15 C vs. T 0.258 (C) 0.258 (T) 0.93 (0.90-0.97) 32 (0-64) 7.00e-05
rs9890563 chr17:17990671 DRG2 [-529bp] All: C 108,990 15 C vs. T - - 1.07 (1.04-1.11) 23 (0-58) 7.10e-05
rs8077338 chr17:17860546 TOM1L2 All: C 108,990 15 T vs. C - - 1.07 (1.03-1.10) 4 (0-55) 8.85e-05
rs6502629 chr17:17869642 TOM1L2 All: C 108,990 15 G vs. A 0.35 (G) 0.033 (A) 0.94 (0.91-0.97) 4 (0-56) 8.98e-05
rs8079418 chr17:17924060 ATPAF2 All: C 108,990 15 T vs. C 0.292 (T) - 0.94 (0.91-0.97) 0 (0-53) 2.69e-04
rs141555313 chr17:17897893 LRRC48 C - 8 C vs. G - - >1 (-) 0 (-) <0.05
rs11655294 chr17:17841859 TOM1L2 C - 10 T vs. C 0.033 (T) - <1 (-) 0 (-) <0.05
rs117361397 chr17:17878856 LRRC48 C - 10 A vs. G 0.025 (G) - >1 (-) 0 (-) <0.05
rs142604123 chr17:17894674 LRRC48 C - 10 A vs. G - - <1 (-) 0 (-) <0.05
rs2955351 chr17:17987285 DRG2 [-3915bp] C - 13 C vs. G - - >1 (-) 4 (-) <0.05
rs34434158 chr17:17869391 TOM1L2 C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs117890270 chr17:17870778 TOM1L2 C - 11 A vs. G 0.025 (G) - >1 (-) 0 (-) <0.05
rs143309642 chr17:17871596 TOM1L2 C - 9 A vs. G - - <1 (-) 31 (-) <0.05
rs117047546 chr17:17963117 GID4 C - 11 T vs. C 0.008 (T) - <1 (-) 37 (-) <0.05
rs138448950 chr17:17975385 GID4 [+3667bp] C - 12 A vs. C - - >1 (-) 34 (-) <0.05
rs77885002 chr17:17992330 DRG2 C - 13 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs79380527 chr17:17844818 TOM1L2 C - 12 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs148613234 chr17:17905197 LRRC48 C - 12 T vs. C - - >1 (-) 26 (-) >0.05
rs147575209 chr17:17901234 LRRC48 C - 12 T vs. C - - <1 (-) 18 (-) >0.05
rs11656725 chr17:17900726 LRRC48 C - 12 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs62073572 chr17:17969054 GID4 C - 9 A vs. G - - >1 (-) 42 (-) >0.05
rs140232670 chr17:17905454 LRRC48 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs79908635 chr17:17973462 GID4 [+1744bp] C - 9 A vs. G 0.058 (A) - <1 (-) 38 (-) >0.05
rs16960835 chr17:17960011 GID4 C - 13 T vs. C 0.042 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs7224815 chr17:17845800 TOM1L2 C - 13 A vs. T 0.35 (T) 0.033 (A) >1 (-) 0 (-) >0.05
rs11656629 chr17:17907768 LRRC48 C - 13 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs116877766 chr17:17982416 DRG2 [-8784bp] C - 10 A vs. T 0.033 (T) - >1 (-) 0 (-) >0.05
rs151202379 chr17:17853821 TOM1L2 C - 9 T vs. C - - >1 (-) 19 (-) >0.05
rs33997182 chr17:17921995 ATPAF2 C - 12 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs79741613 chr17:17924903 ATPAF2 C - 12 T vs. C 0.033 (C) - >1 (-) 0 (-) >0.05
rs114923440 chr17:17972715 GID4 [+997bp] C - 13 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs80251201 chr17:17932008 ATPAF2 C - 13 A vs. G 0.042 (G) 0.025 (G) >1 (-) 0 (-) >0.05
rs11652819 chr17:17922161 ATPAF2 C - 12 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs77426647 chr17:17924136 ATPAF2 C - 12 T vs. G 0.058 (T) - >1 (-) 0 (-) >0.05
rs147679420 chr17:17882283 LRRC48 C - 5 A vs. G - - >1 (-) 46 (-) >0.05

Association studies for this region [+]