B3GALT1, chr2:168675182-168730551 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146888926 chr2:168724513 B3GALT1 C - 7 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146888926 chr2:168724513 B3GALT1 C - 7 A vs. G - - >1 (-) 0 (-) <0.05
rs12471704 chr2:168723890 B3GALT1 C - 13 A vs. G 0.167 (G) 0.408 (G) <1 (-) 0 (-) <0.05
rs11900644 chr2:168728010 B3GALT1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs78829354 chr2:168682052 B3GALT1 C - 6 T vs. C 0.033 (T) - <1 (-) 0 (-) <0.05
rs140711818 chr2:168671320 B3GALT1 [-3862bp] C - 11 A vs. C - - <1 (-) 22 (-) <0.05
rs13402296 chr2:168777113 STK39 [-33417bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs79062205 chr2:168748508 B3GALT1 [+17957bp] C - 8 T vs. C 0.05 (T) - >1 (-) 32 (-) >0.05
rs11678690 chr2:168770610 STK39 [-39920bp] C - 7 T vs. G 0.033 (G) - <1 (-) 41 (-) >0.05
rs72882136 chr2:168741618 B3GALT1 [+11067bp] C - 13 T vs. G 0.042 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs141694926 chr2:168759087 B3GALT1 [+28536bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs836692 chr2:168645406 B3GALT1 [-29776bp] C - 13 T vs. C 0.358 (T) 0.267 (C) <1 (-) 0 (-) >0.05
rs75434677 chr2:168701244 B3GALT1 C - 4 A vs. G 0.042 (A) 0.008 (A) >1 (-) 25 (-) >0.05
rs116692847 chr2:168688373 B3GALT1 C - 9 A vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs113567959 chr2:168628030 B3GALT1 [-47152bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs114835036 chr2:168727833 B3GALT1 C - 9 T vs. C 0.025 (T) - >1 (-) 8 (-) >0.05
rs7591442 chr2:168626286 B3GALT1 [-48896bp] C - 13 A vs. T 0.35 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs836690 chr2:168645991 B3GALT1 [-29191bp] C - 13 A vs. G 0.367 (A) 0.275 (G) <1 (-) 0 (-) >0.05
rs115128923 chr2:168722786 B3GALT1 C - 4 A vs. G 0.042 (A) - >1 (-) 35 (-) >0.05
rs13020412 chr2:168646041 B3GALT1 [-29141bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs76751604 chr2:168717134 B3GALT1 C - 7 A vs. G 0.008 (G) - <1 (-) 31 (-) >0.05
rs836662 chr2:168770779 STK39 [-39751bp] C - 13 T vs. C - - >1 (-) 8 (-) >0.05
rs139888869 chr2:168741438 B3GALT1 [+10887bp] C - 10 A vs. G - - <1 (-) 30 (-) >0.05
rs71430603 chr2:168706793 B3GALT1 C - 12 A vs. C - - <1 (-) 2 (-) >0.05
rs36096871 chr2:168709331 B3GALT1 C - 12 A vs. G 0.058 (A) - >1 (-) 2 (-) >0.05
rs71430604 chr2:168707102 B3GALT1 C - 12 A vs. G 0.058 (A) - >1 (-) 2 (-) >0.05
rs10186642 chr2:168718003 B3GALT1 C - 13 A vs. G 0.025 (A) - >1 (-) 29 (-) >0.05
rs77966364 chr2:168732216 B3GALT1 [+1665bp] C - 11 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs836694 chr2:168644218 B3GALT1 [-30964bp] C - 13 A vs. G 0.35 (A) 0.258 (G) <1 (-) 0 (-) >0.05
rs1816914 chr2:168754507 B3GALT1 [+23956bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs78235306 chr2:168647197 B3GALT1 [-27985bp] C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs10930287 chr2:168659311 B3GALT1 [-15871bp] C - 13 T vs. C 0.2 (C) 0.483 (C) >1 (-) 0 (-) >0.05
rs4144084 chr2:168628283 B3GALT1 [-46899bp] C - 13 A vs. G 0.375 (A) 0.083 (A) >1 (-) 0 (-) >0.05
rs1816915 chr2:168754745 B3GALT1 [+24194bp] C - 13 T vs. C 0.25 (T) 0.458 (C) <1 (-) 0 (-) >0.05
rs4667977 chr2:168659362 B3GALT1 [-15820bp] C - 13 A vs. G 0.2 (A) 0.483 (A) <1 (-) 0 (-) >0.05
rs12999150 chr2:168649930 B3GALT1 [-25252bp] C - 13 A vs. G 0.208 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs836689 chr2:168647152 B3GALT1 [-28030bp] C - 13 A vs. T 0.217 (T) 0.375 (T) >1 (-) 16 (-) >0.05
rs13019136 chr2:168649413 B3GALT1 [-25769bp] C - 13 T vs. G 0.033 (G) 0.1 (G) >1 (-) 13 (-) >0.05
rs2122085 chr2:168630734 B3GALT1 [-44448bp] C - 13 A vs. G 0.475 (A) 0.4 (G) <1 (-) 0 (-) >0.05
rs35120611 chr2:168652672 B3GALT1 [-22510bp] C - 13 T vs. G 0.233 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs61734986 chr2:168646416 B3GALT1 [-28766bp] C - 13 T vs. C 0.05 (T) 0.117 (T) <1 (-) 12 (-) >0.05
rs10183510 chr2:168777505 STK39 [-33025bp] C - 13 A vs. G 0.117 (A) 0.35 (A) <1 (-) 9 (-) >0.05
rs10183123 chr2:168747063 B3GALT1 [+16512bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6433013 chr2:168652809 B3GALT1 [-22373bp] C - 13 T vs. C 0.367 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs836660 chr2:168769921 B3GALT1 [+39370bp] C - 13 T vs. C 0.117 (T) 0.342 (T) <1 (-) 12 (-) >0.05
rs836657 chr2:168766987 B3GALT1 [+36436bp] C - 13 A vs. G 0.117 (A) 0.317 (A) <1 (-) 11 (-) >0.05
rs836656 chr2:168766922 B3GALT1 [+36371bp] C - 13 T vs. C 0.117 (T) 0.342 (T) <1 (-) 11 (-) >0.05
rs836651 chr2:168764579 B3GALT1 [+34028bp] C - 13 T vs. C 0.25 (C) 0.417 (T) >1 (-) 11 (-) >0.05
rs836650 chr2:168761499 B3GALT1 [+30948bp] C - 13 A vs. G 0.242 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs6724543 chr2:168756871 B3GALT1 [+26320bp] C - 13 A vs. G 0.242 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs836659 chr2:168769366 B3GALT1 [+38815bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 12 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.