B3GALT1, chr2:168675182-168730551 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146888926 chr2:168724513 B3GALT1 C - 7 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34155024 chr2:168651627 B3GALT1 [-23555bp] C - 13 A vs. G 0.058 (G) 0.1 (G) >1 (-) 12 (-) >0.05
rs36079569 chr2:168652360 B3GALT1 [-22822bp] C - 13 C vs. G 0.058 (C) 0.092 (C) <1 (-) 12 (-) >0.05
rs836671 chr2:168653776 B3GALT1 [-21406bp] C - 13 T vs. C 0.358 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs836719 chr2:168674638 B3GALT1 [-544bp] C - 13 A vs. G 0.292 (A) 0.333 (G) >1 (-) 0 (-) >0.05
rs6740435 chr2:168648612 B3GALT1 [-26570bp] C - 13 T vs. C 0.05 (T) 0.1 (T) <1 (-) 18 (-) >0.05
rs7595087 chr2:168779981 STK39 [-30549bp] C - 13 T vs. C 0.117 (T) 0.35 (T) <1 (-) 9 (-) >0.05
rs72878723 chr2:168647496 B3GALT1 [-27686bp] C - 12 A vs. G 0.017 (A) - >1 (-) 24 (-) >0.05
rs836663 chr2:168771396 STK39 [-39134bp] C - 13 C vs. G 0.117 (G) 0.333 (G) >1 (-) 9 (-) >0.05
rs10209838 chr2:168770694 STK39 [-39836bp] C - 13 T vs. G 0.117 (T) - <1 (-) 10 (-) >0.05
rs836664 chr2:168772522 STK39 [-38008bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 10 (-) >0.05
rs1838835 chr2:168745684 B3GALT1 [+15133bp] C - 13 T vs. G 0.292 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs10930286 chr2:168657886 B3GALT1 [-17296bp] C - 9 T vs. C 0.142 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs6709658 chr2:168778156 STK39 [-32374bp] C - 13 A vs. C 0.117 (C) 0.35 (C) >1 (-) 8 (-) >0.05
rs2003041 chr2:168774114 STK39 [-36416bp] C - 13 A vs. G - - <1 (-) 8 (-) >0.05
rs113972460 chr2:168678443 B3GALT1 C - 6 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs59651415 chr2:168780498 STK39 [-30032bp] C - 13 A vs. G 0.117 (A) 0.35 (A) <1 (-) 6 (-) >0.05
rs6752880 chr2:168753415 B3GALT1 [+22864bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs77522615 chr2:168763390 B3GALT1 [+32839bp] C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs836672 chr2:168654720 B3GALT1 [-20462bp] C - 13 A vs. G 0.375 (G) 0.258 (A) >1 (-) 0 (-) >0.05
rs1823116 chr2:168743827 B3GALT1 [+13276bp] C - 13 A vs. G 0.275 (G) - >1 (-) 0 (-) >0.05
rs2592340 chr2:168769822 B3GALT1 [+39271bp] C - 13 A vs. G 0.117 (G) 0.325 (G) >1 (-) 11 (-) >0.05
rs2615310 chr2:168769820 B3GALT1 [+39269bp] C - 13 A vs. G 0.117 (G) 0.342 (G) >1 (-) 11 (-) >0.05
rs116349455 chr2:168666598 B3GALT1 [-8584bp] C - 13 A vs. G 0.05 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs10930296 chr2:168750443 B3GALT1 [+19892bp] C - 13 T vs. C 0.25 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs10497329 chr2:168635915 B3GALT1 [-39267bp] C - 13 A vs. G 0.033 (A) 0.3 (A) <1 (-) 49 (-) >0.05
rs836647 chr2:168759755 B3GALT1 [+29204bp] C - 13 A vs. C 0.233 (C) 0.408 (A) >1 (-) 0 (-) >0.05
rs4553785 chr2:168758052 B3GALT1 [+27501bp] C - 13 C vs. G 0.233 (G) 0.417 (C) >1 (-) 0 (-) >0.05
rs72880366 chr2:168659194 B3GALT1 [-15988bp] C - 13 A vs. G 0.042 (G) - >1 (-) 45 (-) >0.05
rs12616325 chr2:168628770 B3GALT1 [-46412bp] C - 13 A vs. T 0.05 (T) 0.325 (T) >1 (-) 47 (-) >0.05
rs2615307 chr2:168774393 STK39 [-36137bp] C - 13 T vs. C 0.117 (C) 0.35 (C) >1 (-) 7 (-) >0.05
rs6752491 chr2:168753111 B3GALT1 [+22560bp] C - 13 T vs. C 0.25 (C) 0.458 (T) >1 (-) 0 (-) >0.05
rs12612454 chr2:168627962 B3GALT1 [-47220bp] C - 13 T vs. C 0.2 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs7576460 chr2:168775061 STK39 [-35469bp] C - 13 A vs. C 0.117 (A) 0.35 (A) <1 (-) 7 (-) >0.05
rs1838836 chr2:168764274 B3GALT1 [+33723bp] C - 13 A vs. G 0.233 (A) 0.417 (G) <1 (-) 0 (-) >0.05
rs79058080 chr2:168754869 B3GALT1 [+24318bp] C - 9 T vs. C 0.017 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs836681 chr2:168658918 B3GALT1 [-16264bp] C - 13 T vs. C 0.383 (C) 0.267 (T) >1 (-) 0 (-) >0.05
rs1903648 chr2:168745068 B3GALT1 [+14517bp] C - 13 C vs. G 0.292 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs836658 chr2:168768897 B3GALT1 [+38346bp] C - 13 T vs. G 0.117 (T) 0.342 (T) <1 (-) 15 (-) >0.05
rs13009410 chr2:168660343 B3GALT1 [-14839bp] C - 13 T vs. C 0.058 (C) 0.092 (C) >1 (-) 15 (-) >0.05
rs112993530 chr2:168671254 B3GALT1 [-3928bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs836673 chr2:168655077 B3GALT1 [-20105bp] C - 13 T vs. C 0.375 (T) 0.258 (C) <1 (-) 0 (-) >0.05
rs11892261 chr2:168652515 B3GALT1 [-22667bp] C - 13 A vs. G 0.092 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs13425415 chr2:168704080 B3GALT1 C - 13 C vs. G 0.075 (G) - <1 (-) 36 (-) >0.05
rs58065531 chr2:168670968 B3GALT1 [-4214bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs836655 chr2:168766729 B3GALT1 [+36178bp] C - 13 T vs. G 0.117 (T) 0.35 (T) <1 (-) 16 (-) >0.05
rs10202496 chr2:168751364 B3GALT1 [+20813bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs836654 chr2:168766697 B3GALT1 [+36146bp] C - 13 T vs. G 0.117 (G) 0.35 (G) >1 (-) 17 (-) >0.05
rs35867406 chr2:168714075 B3GALT1 C - 12 A vs. G 0.058 (A) 0.017 (A) >1 (-) 0 (-) >0.05
rs6734498 chr2:168712041 B3GALT1 C - 12 A vs. G 0.058 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs150648556 chr2:168726975 B3GALT1 C - 12 A vs. G - - >1 (-) 47 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.