B3GALT1, chr2:168675182-168730551 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146888926 chr2:168724513 B3GALT1 C - 7 A vs. G - - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs146869812 chr2:168720842 B3GALT1 C - 3 C vs. G - - <1 (-) 0 (-) >0.05
rs142945818 chr2:168761757 B3GALT1 [+31206bp] C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs16854363 chr2:168752343 B3GALT1 [+21792bp] C - 10 T vs. C 0.008 (T) 0.25 (T) >1 (-) 52 (-) >0.05
rs77878740 chr2:168634310 B3GALT1 [-40872bp] C - 13 T vs. C 0.233 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs34809127 chr2:168684101 B3GALT1 C - 13 C vs. G 0.108 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs144175117 chr2:168712631 B3GALT1 C - 5 T vs. C - - >1 (-) 23 (-) >0.05
rs836686 chr2:168648447 B3GALT1 [-26735bp] C - 13 A vs. C 0.158 (C) 0.292 (C) >1 (-) 12 (-) >0.05
rs113031653 chr2:168728954 B3GALT1 C - 11 A vs. G 0.008 (A) - <1 (-) 1 (-) >0.05
rs836669 chr2:168741514 B3GALT1 [+10963bp] C - 13 T vs. C 0.183 (T) 0.408 (C) >1 (-) 33 (-) >0.05
rs836701 chr2:168689537 B3GALT1 C - 13 C vs. G 0.3 (G) 0.367 (C) >1 (-) 0 (-) >0.05
rs72623168 chr2:168757549 B3GALT1 [+26998bp] C - 10 A vs. G - 0.25 (G) <1 (-) 51 (-) >0.05
rs4667985 chr2:168683690 B3GALT1 C - 13 A vs. G 0.1 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs78988114 chr2:168753597 B3GALT1 [+23046bp] C - 10 T vs. C 0.008 (T) 0.192 (T) >1 (-) 51 (-) >0.05
rs72623167 chr2:168731851 B3GALT1 [+1300bp] C - 8 A vs. G - 0.258 (A) <1 (-) 0 (-) >0.05
rs148493880 chr2:168628781 B3GALT1 [-46401bp] C - 5 T vs. G - - >1 (-) 24 (-) >0.05
rs111741344 chr2:168703773 B3GALT1 C - 13 A vs. C 0.125 (C) - >1 (-) 0 (-) >0.05
rs16854364 chr2:168752887 B3GALT1 [+22336bp] C - 10 A vs. G - 0.2 (G) <1 (-) 50 (-) >0.05
rs60208270 chr2:168752669 B3GALT1 [+22118bp] C - 10 A vs. T - 0.2 (T) <1 (-) 50 (-) >0.05
rs56315066 chr2:168631689 B3GALT1 [-43493bp] C - 13 A vs. C 0.383 (A) 0.275 (A) <1 (-) 0 (-) >0.05
rs116350778 chr2:168671449 B3GALT1 [-3733bp] C - 5 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs111760451 chr2:168638377 B3GALT1 [-36805bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs2441371 chr2:168651872 B3GALT1 [-23310bp] C - 13 A vs. C 0.167 (C) 0.292 (C) >1 (-) 18 (-) >0.05
rs16854365 chr2:168752901 B3GALT1 [+22350bp] C - 10 T vs. C - 0.2 (C) <1 (-) 51 (-) >0.05
rs836708 chr2:168729982 B3GALT1 C - 13 A vs. G 0.242 (A) 0.417 (G) >1 (-) 0 (-) >0.05
rs836687 chr2:168648239 B3GALT1 [-26943bp] C - 13 A vs. G 0.15 (G) 0.292 (G) >1 (-) 12 (-) >0.05
rs80227620 chr2:168689139 B3GALT1 C - 12 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05
rs836652 chr2:168765036 B3GALT1 [+34485bp] C - 6 A vs. G 0.2 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs7605384 chr2:168653841 B3GALT1 [-21341bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs116532399 chr2:168660239 B3GALT1 [-14943bp] C - 10 A vs. C 0.008 (C) - <1 (-) 35 (-) >0.05
rs55901650 chr2:168660006 B3GALT1 [-15176bp] C - 13 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs836653 chr2:168765680 B3GALT1 [+35129bp] C - 6 A vs. G 0.192 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs145093454 chr2:168764963 B3GALT1 [+34412bp] C - 12 T vs. C - - >1 (-) 37 (-) >0.05
rs66864629 chr2:168660377 B3GALT1 [-14805bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs700542 chr2:168651034 B3GALT1 [-24148bp] C - 13 A vs. G 0.167 (G) 0.292 (G) >1 (-) 12 (-) >0.05
rs138025995 chr2:168657100 B3GALT1 [-18082bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs1947111 chr2:168772574 STK39 [-37956bp] C - 4 T vs. C 0.267 (C) 0.142 (C) <1 (-) 43 (-) >0.05
rs1004366 chr2:168640233 B3GALT1 [-34949bp] C - 13 A vs. C 0.258 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs58055641 chr2:168685929 B3GALT1 C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs6738797 chr2:168653225 B3GALT1 [-21957bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12470912 chr2:168748110 B3GALT1 [+17559bp] C - 13 A vs. G 0.167 (A) 0.308 (A) <1 (-) 41 (-) >0.05
rs111311577 chr2:168660723 B3GALT1 [-14459bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6738302 chr2:168652802 B3GALT1 [-22380bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7589203 chr2:168738495 B3GALT1 [+7944bp] C - 12 T vs. C 0.167 (T) 0.317 (T) <1 (-) 12 (-) >0.05
rs148177092 chr2:168664331 B3GALT1 [-10851bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs66829225 chr2:168691257 B3GALT1 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs836714 chr2:168669759 B3GALT1 [-5423bp] C - 13 T vs. C 0.142 (C) 0.242 (C) >1 (-) 10 (-) >0.05
rs700546 chr2:168682277 B3GALT1 C - 13 A vs. G 0.117 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs67700417 chr2:168656714 B3GALT1 [-18468bp] C - 13 A vs. G - 0.392 (A) >1 (-) 24 (-) >0.05
rs2121324 chr2:168641835 B3GALT1 [-33347bp] C - 13 A vs. T 0.25 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs836666 chr2:168733814 B3GALT1 [+3263bp] C - 13 A vs. G 0.275 (G) 0.325 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.