CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs72856718 chr6:31125257 CCHCR1 C - 12 A vs. C 0.05 (A) - <1 (-) 0 (-) >0.05
rs3095303 chr6:31070078 C6orf15 [-8922bp] C - 12 A vs. G 0.325 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs9263619 chr6:31072979 C6orf15 [-6021bp] C - 12 A vs. T 0.333 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs2233966 chr6:31080859 C6orf15 [+523bp] C - 12 A vs. G 0.467 (A) 0.45 (G) >1 (-) 0 (-) >0.05
rs17197101 chr6:31126409 TCF19 C - 12 T vs. G 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263851 chr6:31156195 POU5F1 [+7687bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs9263524 chr6:31067359 C6orf15 [-11641bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9263525 chr6:31067402 C6orf15 [-11598bp] C - 12 T vs. C 0.325 (T) - <1 (-) 0 (-) >0.05
rs17197395 chr6:31154171 POU5F1 [+5663bp] C - 12 A vs. G 0.05 (G) - <1 (-) 12 (-) >0.05
rs3134788 chr6:31153020 POU5F1 [+4512bp] C - 12 T vs. C - - >1 (-) 22 (-) >0.05
rs1265177 chr6:31161577 HCG27 [-3960bp] C - 12 A vs. G 0.208 (G) - >1 (-) 0 (-) >0.05
rs1265178 chr6:31161229 HCG27 [-4308bp] C - 12 A vs. G 0.217 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs17197108 chr6:31126697 TCF19 C - 12 A vs. C 0.067 (A) - <1 (-) 0 (-) >0.05
rs2523833 chr6:31109947 CCHCR1 [-269bp] C - 6 T vs. C 0.275 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs9263598 chr6:31071565 C6orf15 [-7435bp] C - 12 C vs. G 0.333 (C) 0.083 (C) <1 (-) 0 (-) >0.05
rs9263599 chr6:31071581 C6orf15 [-7419bp] C - 12 A vs. G 0.333 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs73728292 chr6:31170066 HCG27 C - 12 A vs. G 0.083 (G) 0.05 (G) <1 (-) 16 (-) >0.05
rs1265181 chr6:31155785 POU5F1 [+7277bp] C - 12 C vs. G 0.217 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs3094612 chr6:31163638 HCG27 [-1899bp] C - 12 C vs. G 0.258 (C) 0.258 (C) <1 (-) 20 (-) >0.05
rs2517526 chr6:31071979 C6orf15 [-7021bp] C - 12 C vs. G 0.342 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs9263556 chr6:31069226 C6orf15 [-9774bp] C - 12 A vs. C 0.325 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs9263557 chr6:31069229 C6orf15 [-9771bp] C - 12 A vs. G 0.325 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs9263594 chr6:31071381 C6orf15 [-7619bp] C - 12 C vs. G 0.333 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs1265061 chr6:31078257 C6orf15 [-743bp] C - 12 A vs. C 0.333 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs1265062 chr6:31078005 C6orf15 [-995bp] C - 12 T vs. C 0.333 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs3130510 chr6:31154493 POU5F1 [+5985bp] C - 12 A vs. G 0.217 (A) 0.042 (A) <1 (-) 6 (-) >0.05
rs3130507 chr6:31147476 POU5F1 C - 12 A vs. G - - <1 (-) 24 (-) >0.05
rs3887383 chr6:31172317 HCG27 [+572bp] C - 12 A vs. G - - >1 (-) 11 (-) >0.05
rs34209658 chr6:31073337 C6orf15 [-5663bp] C - 12 T vs. G 0.075 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs62175163 chr6:31160038 HCG27 [-5499bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs35802713 chr6:31073369 C6orf15 [-5631bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs1265066 chr6:31077600 C6orf15 [-1400bp] C - 12 T vs. G 0.333 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs17197199 chr6:31138472 POU5F1 C - 12 T vs. C 0.033 (T) 0.167 (T) >1 (-) 53 (-) >0.05
rs3130548 chr6:31067852 C6orf15 [-11148bp] C - 12 A vs. G 0.475 (A) 0.25 (G) >1 (-) 0 (-) >0.05
rs2508011 chr6:31071058 C6orf15 [-7942bp] C - 12 A vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs4947300 chr6:31073857 C6orf15 [-5143bp] C - 12 A vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs2394878 chr6:31066585 C6orf15 [-12415bp] C - 12 A vs. C 0.342 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs2517403 chr6:31067009 C6orf15 [-11991bp] C - 12 T vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs9263519 chr6:31067184 C6orf15 [-11816bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2263309 chr6:31066886 C6orf15 [-12114bp] C - 12 A vs. G 0.333 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs3130971 chr6:31068101 C6orf15 [-10899bp] C - 12 A vs. T 0.333 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs9263588 chr6:31071144 C6orf15 [-7856bp] C - 12 T vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs9391709 chr6:31077405 C6orf15 [-1595bp] C - 12 C vs. G 0.067 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs12662091 chr6:31077046 C6orf15 [-1954bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2508010 chr6:31071100 C6orf15 [-7900bp] C - 12 T vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs9263535 chr6:31067758 C6orf15 [-11242bp] C - 12 A vs. G 0.333 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs2517485 chr6:31074101 C6orf15 [-4899bp] C - 12 T vs. C 0.333 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs9263590 chr6:31071271 C6orf15 [-7729bp] C - 12 T vs. C 0.333 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs10947135 chr6:31076199 C6orf15 [-2801bp] C - 12 A vs. T - - <1 (-) 0 (-) >0.05
rs3130505 chr6:31144717 POU5F1 C - 12 A vs. T 0.258 (T) 0.258 (T) >1 (-) 27 (-) >0.05

Association studies for this region [+]