CLIP4, chr2:29320571-29412509 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138012989 chr2:29283252 FAM179A C - 10 C vs. G - - <1 (-) 48 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs80165280 chr2:29321874 CLIP4 C - 13 T vs. C 0.133 (T) - >1 (-) 60 (-) >0.05
rs79848951 chr2:29422372 ALK C - 13 A vs. T 0.017 (T) - >1 (-) 0 (-) >0.05
rs76509366 chr2:29438406 ALK C - 13 A vs. G 0.042 (G) - <1 (-) 40 (-) >0.05
rs76590213 chr2:29457517 ALK C - 13 C vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs114280334 chr2:29404036 CLIP4 C - 6 T vs. C 0.008 (T) - >1 (-) 50 (-) >0.05
rs142062387 chr2:29271310 FAM179A C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs7571412 chr2:29275272 FAM179A C - 13 T vs. C 0.492 (T) 0.292 (T) >1 (-) 48 (-) >0.05
rs7562696 chr2:29303600 C2orf71 [+6473bp] C - 13 A vs. G 0.45 (G) 0.175 (G) <1 (-) 0 (-) >0.05
rs78125677 chr2:29457503 ALK C - 13 T vs. C 0.075 (C) - <1 (-) 0 (-) >0.05
rs4666163 chr2:29271031 FAM179A C - 13 A vs. C 0.333 (A) 0.175 (A) <1 (-) 56 (-) >0.05
rs35780121 chr2:29447185 ALK C - 3 T vs. G 0.008 (T) - <1 (-) 0 (-) >0.05
rs115389112 chr2:29388325 CLIP4 C - 4 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs115037785 chr2:29341753 CLIP4 C - 9 A vs. G 0.017 (G) - >1 (-) 11 (-) >0.05
rs7579035 chr2:29312240 CLIP4 [-8331bp] C - 13 T vs. C 0.258 (C) - >1 (-) 64 (-) >0.05
rs7562482 chr2:29312255 CLIP4 [-8316bp] C - 13 T vs. C 0.258 (T) - <1 (-) 64 (-) >0.05
rs7569311 chr2:29275940 FAM179A C - 13 A vs. G 0.492 (A) 0.283 (A) >1 (-) 46 (-) >0.05
rs75318351 chr2:29380087 CLIP4 C - 7 T vs. G 0.008 (T) - >1 (-) 34 (-) >0.05
rs147806711 chr2:29441231 ALK C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs62130594 chr2:29454152 ALK C - 13 A vs. G 0.067 (A) - >1 (-) 31 (-) >0.05
rs79309332 chr2:29456180 ALK C - 13 A vs. T 0.042 (A) - >1 (-) 3 (-) >0.05
rs4666178 chr2:29429888 ALK C - 13 A vs. G 0.2 (G) 0.158 (G) >1 (-) 23 (-) >0.05
rs56408933 chr2:29300239 C2orf71 [+3112bp] C - 13 T vs. G 0.25 (G) - >1 (-) 63 (-) >0.05
rs11690863 chr2:29453250 ALK C - 13 T vs. C 0.067 (T) - <1 (-) 22 (-) >0.05
rs4387740 chr2:29447108 ALK C - 13 A vs. G 0.267 (G) 0.267 (G) <1 (-) 36 (-) >0.05
rs115313936 chr2:29273657 FAM179A C - 12 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs115759479 chr2:29318569 CLIP4 [-2002bp] C - 4 C vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs150429532 chr2:29457301 ALK C - 3 C vs. G - - >1 (-) 60 (-) >0.05
rs116060871 chr2:29284121 FAM179A C - 11 T vs. C 0.017 (T) - >1 (-) 25 (-) >0.05
rs77070689 chr2:29378031 CLIP4 C - 9 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs62130596 chr2:29454725 ALK C - 13 A vs. G 0.067 (G) - >1 (-) 30 (-) >0.05
rs717242 chr2:29271451 FAM179A C - 13 T vs. C 0.333 (T) 0.175 (T) <1 (-) 54 (-) >0.05
rs10177215 chr2:29423716 ALK C - 13 T vs. G 0.142 (T) - <1 (-) 0 (-) >0.05
rs57066968 chr2:29453764 ALK C - 13 A vs. G 0.075 (G) 0.008 (G) >1 (-) 8 (-) >0.05
rs75881181 chr2:29461524 ALK C - 13 C vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs34470534 chr2:29442002 ALK C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs71444409 chr2:29320448 CLIP4 [-123bp] C - 13 T vs. C 0.017 (T) - <1 (-) 33 (-) >0.05
rs59633688 chr2:29286509 C2orf71 C - 12 T vs. C 0.283 (C) 0.358 (T) <1 (-) 21 (-) >0.05
rs116748971 chr2:29356810 CLIP4 C - 4 A vs. G 0.017 (G) - <1 (-) 43 (-) >0.05
rs2339380 chr2:29453252 ALK C - 13 T vs. C 0.1 (C) 0.175 (C) >1 (-) 22 (-) >0.05
rs76192195 chr2:29343119 CLIP4 C - 10 A vs. G 0.042 (A) - >1 (-) 0 (-) >0.05
rs2950828 chr2:29424546 ALK C - 13 A vs. G 0.15 (A) - <1 (-) 41 (-) >0.05
rs138666949 chr2:29418978 ALK C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs6547908 chr2:29298635 C2orf71 [+1508bp] C - 13 C vs. G - 0.342 (C) <1 (-) 32 (-) >0.05
rs78743580 chr2:29462298 ALK C - 13 A vs. T 0.092 (A) - >1 (-) 0 (-) >0.05
rs74535085 chr2:29462271 ALK C - 13 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs12619049 chr2:29446701 ALK C - 13 T vs. C 0.45 (C) 0.167 (C) >1 (-) 38 (-) >0.05
rs144598248 chr2:29300728 C2orf71 [+3601bp] C - 6 A vs. T - - <1 (-) 0 (-) >0.05
rs71444405 chr2:29303589 C2orf71 [+6462bp] C - 13 T vs. C 0.033 (T) - <1 (-) 33 (-) >0.05
rs13397113 chr2:29462405 ALK C - 13 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs78632758 chr2:29408781 CLIP4 C - 12 T vs. G 0.042 (G) - <1 (-) 26 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.