CLIP4, chr2:29320571-29412509 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138012989 chr2:29283252 FAM179A C - 10 C vs. G - - <1 (-) 48 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs80263318 chr2:29329386 CLIP4 C - 4 C vs. G - 0.1 (G) >1 (-) 0 (-) >0.05
rs60584994 chr2:29455758 ALK C - 12 C vs. G - 0.008 (C) <1 (-) 0 (-) >0.05
rs1534545 chr2:29444076 ALK C - 13 T vs. G 0.225 (T) 0.283 (G) <1 (-) 0 (-) >0.05
rs59046979 chr2:29369913 CLIP4 C - 13 C vs. G 0.083 (C) 0.25 (C) >1 (-) 46 (-) >0.05
rs3100242 chr2:29376213 CLIP4 C - 13 T vs. C 0.1 (T) 0.233 (T) >1 (-) 48 (-) >0.05
rs13003156 chr2:29369622 CLIP4 C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 46 (-) >0.05
rs75521058 chr2:29369860 CLIP4 C - 13 T vs. G 0.1 (G) 0.242 (G) <1 (-) 46 (-) >0.05
rs75276619 chr2:29295186 C2orf71 C - 7 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs3768672 chr2:29417948 ALK C - 13 C vs. G 0.267 (G) 0.283 (C) >1 (-) 0 (-) >0.05
rs117600268 chr2:29335177 CLIP4 C - 4 C vs. G - 0.1 (G) >1 (-) 0 (-) >0.05
rs3924613 chr2:29440916 ALK C - 13 C vs. G 0.275 (C) 0.275 (G) <1 (-) 0 (-) >0.05
rs7585244 chr2:29283509 FAM179A C - 13 T vs. C 0.075 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs75599627 chr2:29418587 ALK C - 13 T vs. C 0.125 (T) - <1 (-) 0 (-) >0.05
rs2015219 chr2:29401012 CLIP4 C - 13 T vs. C 0.492 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs1073319 chr2:29440454 ALK C - 13 A vs. G 0.275 (A) 0.275 (G) <1 (-) 0 (-) >0.05
rs2278879 chr2:29414986 ALK [-654bp] C - 13 A vs. G 0.258 (G) 0.275 (A) >1 (-) 0 (-) >0.05
rs6724013 chr2:29426501 ALK C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12990658 chr2:29440472 ALK C - 13 T vs. C 0.117 (C) - >1 (-) 0 (-) >0.05
rs2123442 chr2:29402048 CLIP4 C - 13 T vs. C 0.5 (T) 0.1 (C) <1 (-) 0 (-) >0.05
rs1026278 chr2:29413366 CLIP4 [+857bp] C - 13 A vs. C 0.267 (A) 0.3 (C) <1 (-) 0 (-) >0.05
rs3100245 chr2:29380843 CLIP4 C - 13 A vs. G 0.05 (G) 0.167 (G) <1 (-) 22 (-) >0.05
rs12620470 chr2:29327625 CLIP4 C - 13 C vs. G 0.075 (G) 0.425 (G) <1 (-) 47 (-) >0.05
rs7598888 chr2:29320680 CLIP4 C - 13 A vs. G 0.142 (A) - >1 (-) 57 (-) >0.05
rs144965403 chr2:29312569 CLIP4 [-8002bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs13000274 chr2:29391545 CLIP4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11127205 chr2:29425620 ALK C - 13 A vs. G 0.258 (A) 0.283 (G) <1 (-) 0 (-) >0.05
rs3100225 chr2:29365125 CLIP4 C - 13 C vs. G 0.392 (G) 0.458 (G) <1 (-) 42 (-) >0.05
rs3100241 chr2:29376110 CLIP4 C - 13 T vs. C 0.475 (C) 0.033 (C) <1 (-) 0 (-) >0.05
rs56071005 chr2:29443623 ALK C - 8 A vs. G 0.017 (A) - >1 (-) 9 (-) >0.05
rs6736999 chr2:29387572 CLIP4 C - 13 A vs. G 0.1 (A) 0.167 (A) >1 (-) 29 (-) >0.05
rs12619135 chr2:29416946 ALK C - 13 T vs. C 0.267 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs1881420 chr2:29416481 ALK C - 13 T vs. C 0.267 (C) 0.275 (T) >1 (-) 0 (-) >0.05
rs17007554 chr2:29297758 C2orf71 [+631bp] C - 13 T vs. C 0.267 (T) 0.317 (T) <1 (-) 6 (-) >0.05
rs34360803 chr2:29291931 C2orf71 C - 13 A vs. G 0.25 (A) 0.192 (A) >1 (-) 44 (-) >0.05
rs13017531 chr2:29441905 ALK C - 13 C vs. G 0.117 (G) - >1 (-) 0 (-) >0.05
rs72788189 chr2:29286031 C2orf71 C - 13 T vs. C - - <1 (-) 25 (-) >0.05
rs74337695 chr2:29369413 CLIP4 C - 13 A vs. G 0.05 (G) 0.242 (G) <1 (-) 25 (-) >0.05
rs111869224 chr2:29328182 CLIP4 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs11675600 chr2:29290893 C2orf71 C - 9 C vs. G 0.017 (C) - <1 (-) 0 (-) >0.05
rs139389624 chr2:29284316 C2orf71 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs2879454 chr2:29401499 CLIP4 C - 13 T vs. C 0.5 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs56132472 chr2:29416615 ALK C - 13 A vs. G 0.125 (A) - <1 (-) 0 (-) >0.05
rs34418741 chr2:29424920 ALK C - 13 T vs. C 0.258 (T) 0.283 (C) <1 (-) 0 (-) >0.05
rs10495767 chr2:29287192 C2orf71 C - 13 A vs. G 0.242 (A) 0.2 (A) >1 (-) 37 (-) >0.05
rs142037400 chr2:29405565 CLIP4 C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs921098 chr2:29270602 FAM179A C - 13 C vs. G 0.467 (G) 0.267 (C) >1 (-) 55 (-) >0.05
rs74769602 chr2:29460746 ALK C - 13 A vs. G 0.142 (G) - <1 (-) 11 (-) >0.05
rs74824212 chr2:29422539 ALK C - 6 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs10200936 chr2:29386646 CLIP4 C - 13 C vs. G 0.483 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs3100224 chr2:29364926 CLIP4 C - 13 T vs. C 0.383 (T) 0.433 (T) >1 (-) 45 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.