CPLX1, chr4:778745-819986 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11732965 chr4:869359 GAK All: C 108,990 15 A vs. C 0.117 (A) 0.092 (A) 1.23 (1.17-1.29) 39 (0-67) 3.89e-17
Meta_image?name=rs11732965

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112744673 chr4:764753 PCGF3 [+325bp] C - 12 T vs. C - 0.133 (T) >1 (-) 0 (-) >0.05
rs75203223 chr4:764800 PCGF3 [+372bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
chr4:794595 chr4:794595 CPLX1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs3816673 chr4:781777 CPLX1 C - 13 A vs. G 0.358 (A) 0.417 (G) >1 (-) 0 (-) >0.05
rs34163945 chr4:795568 CPLX1 C - 13 T vs. C 0.1 (T) - <1 (-) 16 (-) >0.05
rs10213196 chr4:742592 PCGF3 C - 12 T vs. C 0.042 (T) 0.025 (T) >1 (-) 33 (-) >0.05
rs10213001 chr4:742591 PCGF3 C - 12 A vs. G 0.042 (A) 0.025 (A) >1 (-) 33 (-) >0.05
rs899392 chr4:758221 PCGF3 C - 13 T vs. C 0.333 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs6858101 chr4:759335 PCGF3 C - 13 A vs. G 0.317 (A) 0.442 (A) >1 (-) 0 (-) >0.05
rs55700741 chr4:757639 PCGF3 C - 12 A vs. G 0.033 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs11942387 chr4:847317 GAK C - 13 A vs. G 0.417 (A) 0.192 (A) >1 (-) 0 (-) >0.05
rs75673685 chr4:816900 CPLX1 C - 12 T vs. C 0.083 (T) - >1 (-) 37 (-) >0.05
rs78931060 chr4:799758 CPLX1 C - 12 T vs. G 0.008 (G) - >1 (-) 5 (-) >0.05
rs17165089 chr4:845849 GAK C - 12 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs6854553 chr4:861998 GAK C - 13 A vs. G 0.417 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs115130241 chr4:800710 CPLX1 C - 10 T vs. C 0.033 (T) - <1 (-) 35 (-) >0.05
rs55715360 chr4:771642 CPLX1 [-7103bp] C - 12 T vs. G 0.017 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs3733352 chr4:861498 GAK C - 13 T vs. C 0.433 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs17721689 chr4:744067 PCGF3 C - 10 C vs. G 0.025 (C) - >1 (-) 0 (-) >0.05
rs2335499 chr4:837994 GAK [-5070bp] C - 11 T vs. C - - >1 (-) 13 (-) >0.05
rs2306245 chr4:862156 GAK C - 13 T vs. C 0.417 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs114682281 chr4:758491 PCGF3 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs11735448 chr4:849871 GAK C - 13 A vs. G 0.4 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs55955900 chr4:752166 PCGF3 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2242234 chr4:755129 PCGF3 C - 12 T vs. C 0.025 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs73207751 chr4:787947 CPLX1 C - 12 T vs. C 0.025 (T) 0.108 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]