PCGF3, chr4:699537-764428 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3775146 chr4:785228 CPLX1 C - 13 C vs. G 0.242 (C) 0.342 (C) >1 (-) 18 (-) <5.00e-08
rs11729193 chr4:734351 PCGF3 C - 12 A vs. G 0.425 (A) 0.492 (A) >1 (-) 24 (-) <5.00e-08
rs62294082 chr4:761932 PCGF3 All: C 108,990 15 A vs. G 0.042 (A) - 1.49 (1.28-1.74) 0 (0-51) 2.28e-07
rs77943567 chr4:802144 CPLX1 All: C 101,770 13 T vs. C 0.025 (T) - 0.72 (0.64-0.82) 26 (0-61) 3.19e-07
rs62294063 chr4:750663 PCGF3 C - 13 C vs. G 0.092 (C) 0.067 (C) >1 (-) 27 (-) <1.00e-04
rs73058469 chr4:752132 PCGF3 C - 13 C vs. G 0.083 (G) 0.092 (G) <1 (-) 25 (-) <1.00e-04
rs62294076 chr4:759463 PCGF3 All: C 108,990 15 A vs. G 0.083 (A) 0.083 (A) 1.14 (1.08-1.21) 29 (0-62) 2.92e-06
rs62294078 chr4:759721 PCGF3 All: C 108,990 15 T vs. C 0.092 (T) 0.075 (T) 1.15 (1.08-1.22) 22 (0-57) 3.85e-06
rs2242235 chr4:755210 PCGF3 All: C 108,990 15 G vs. A 0.092 (G) 0.083 (G) 1.14 (1.08-1.21) 28 (0-61) 4.82e-06
rs62294074 chr4:757598 PCGF3 All: C 108,990 15 A vs. C 0.092 (A) 0.083 (A) 1.14 (1.08-1.21) 29 (0-62) 5.03e-06
rs62294067 chr4:751946 PCGF3 All: C 108,990 15 T vs. C - - 0.88 (0.83-0.93) 30 (0-62) 5.57e-06
rs62294077 chr4:759576 PCGF3 All: C 108,990 15 T vs. C 0.092 (T) 0.067 (T) 1.14 (1.08-1.21) 28 (0-61) 5.71e-06
rs62294079 chr4:760175 PCGF3 All: C 108,990 15 T vs. C 0.092 (T) 0.083 (T) 1.14 (1.08-1.20) 29 (0-62) 5.91e-06
rs62294081 chr4:761661 PCGF3 All: C 108,990 15 T vs. C 0.092 (T) 0.075 (T) 1.14 (1.08-1.21) 30 (0-62) 5.92e-06
rs1026741 chr4:763407 PCGF3 All: C 108,990 15 T vs. C 0.092 (T) 0.083 (T) 1.14 (1.08-1.20) 29 (0-62) 6.17e-06
rs58212655 chr4:761026 PCGF3 All: C 108,990 15 G vs. T 0.092 (G) 0.083 (G) 1.14 (1.08-1.20) 29 (0-62) 6.18e-06
rs62294121 chr4:767202 PCGF3 [+2774bp] All: C 108,990 15 T vs. C 0.075 (T) 0.075 (T) 1.14 (1.08-1.21) 30 (0-62) 6.35e-06
rs73058482 chr4:759872 PCGF3 All: C 108,990 15 C vs. T 0.092 (C) 0.075 (C) 1.14 (1.08-1.21) 31 (0-63) 6.37e-06
rs1811560 chr4:763229 PCGF3 All: C 108,990 15 T vs. C - - 0.88 (0.83-0.93) 31 (0-63) 6.76e-06
rs62294083 chr4:765545 PCGF3 [+1117bp] All: C 108,990 15 T vs. C 0.092 (T) 0.092 (T) 1.14 (1.08-1.20) 28 (0-61) 6.92e-06
rs73058497 chr4:768647 PCGF3 [+4219bp] All: C 108,990 15 G vs. A 0.092 (G) 0.092 (G) 1.14 (1.08-1.20) 30 (0-62) 7.19e-06
rs62294061 chr4:750296 PCGF3 All: C 108,990 15 T vs. C 0.083 (T) 0.058 (T) 1.14 (1.08-1.21) 28 (0-61) 7.73e-06
rs77937203 chr4:749620 PCGF3 All: C 101,770 13 T vs. G - - 1.27 (1.15-1.42) 47 (0-72) 8.33e-06
rs62294124 chr4:772667 CPLX1 [-6078bp] All: C 108,990 15 A vs. G 0.092 (A) 0.092 (A) 1.14 (1.08-1.20) 31 (0-63) 8.57e-06
rs62294125 chr4:775498 CPLX1 [-3247bp] All: C 108,990 15 A vs. G 0.1 (A) 0.117 (A) 1.14 (1.07-1.20) 31 (0-63) 9.38e-06
rs3775148 chr4:785443 CPLX1 All: C 108,990 15 T vs. C 0.083 (T) 0.075 (T) 1.14 (1.07-1.20) 30 (0-62) 1.02e-05
rs62294129 chr4:784176 CPLX1 All: C 108,990 15 C vs. T 0.092 (C) 0.067 (C) 1.14 (1.07-1.20) 31 (0-63) 1.13e-05
rs62296764 chr4:714092 PCGF3 All: C 38,877 12 G vs. A 0.017 (G) - 1.66 (1.32-2.08) 0 (0-56) 1.16e-05
rs141277478 chr4:710487 PCGF3 All: C 38,877 12 G vs. A - - 0.60 (0.48-0.76) 0 (0-57) 1.36e-05
rs62294130 chr4:784879 CPLX1 All: C 108,990 15 A vs. G 0.075 (A) 0.108 (A) 1.14 (1.07-1.20) 32 (0-63) 1.37e-05
rs11735877 chr4:780083 CPLX1 All: C 108,990 15 A vs. G 0.175 (A) - 0.91 (0.87-0.95) 6 (0-57) 1.52e-05
rs4234854 chr4:756271 PCGF3 C - 13 C vs. G 0.217 (C) 0.167 (C) >1 (-) 0 (-) <1.00e-04
rs6838241 chr4:756686 PCGF3 C - 13 A vs. C 0.217 (C) 0.183 (C) <1 (-) 0 (-) <1.00e-04
rs7376690 chr4:813726 CPLX1 All: C 108,990 15 G vs. A 0.425 (G) 0.3 (G) 0.93 (0.91-0.96) 0 (0-23) 2.68e-05
rs4690299 chr4:741473 PCGF3 All: C 105,041 14 C vs. T - - 1.09 (1.05-1.14) 46 (0-71) 3.09e-05
rs7687101 chr4:812679 CPLX1 All: C 108,990 15 T vs. G 0.442 (T) 0.292 (T) 0.94 (0.91-0.97) 0 (0-27) 3.20e-05
rs11248042 chr4:812598 CPLX1 All: C 108,990 15 C vs. T 0.35 (C) 0.458 (T) 1.07 (1.04-1.11) 21 (0-57) 3.31e-05
rs73060334 chr4:787517 CPLX1 All: C 108,990 15 A vs. G 0.1 (A) 0.092 (A) 1.12 (1.06-1.18) 8 (0-45) 3.65e-05
rs73060336 chr4:787845 CPLX1 All: C 108,990 15 T vs. C 0.092 (T) 0.092 (T) 1.12 (1.06-1.18) 8 (0-45) 3.65e-05
rs6599376 chr4:790222 CPLX1 All: C 108,990 15 C vs. T - - 0.89 (0.85-0.94) 7 (0-43) 3.99e-05
rs75422798 chr4:773092 CPLX1 [-5653bp] All: C 108,990 15 A vs. G 0.1 (A) 0.092 (A) 1.14 (1.07-1.22) 25 (0-60) 4.27e-05
rs3775144 chr4:785105 CPLX1 All: C 105,041 14 T vs. C 0.058 (T) - 1.15 (1.07-1.23) 34 (0-65) 4.40e-05
rs77209954 chr4:770065 PCGF3 [+5637bp] All: C 105,041 14 T vs. G 0.1 (T) 0.108 (T) 1.14 (1.07-1.22) 30 (0-63) 4.47e-05
rs75811058 chr4:754675 PCGF3 All: C 105,041 14 T vs. C 0.092 (T) - 1.14 (1.07-1.22) 26 (0-61) 4.51e-05
rs12644402 chr4:759449 PCGF3 All: C 105,041 14 T vs. C 0.092 (T) 0.108 (T) 1.14 (1.07-1.22) 27 (0-61) 4.63e-05
rs12642051 chr4:759406 PCGF3 All: C 105,041 14 A vs. G 0.1 (A) 0.108 (A) 1.14 (1.07-1.22) 26 (0-61) 4.99e-05
rs77684775 chr4:782254 CPLX1 All: C 108,990 15 T vs. C 0.1 (T) 0.075 (T) 1.14 (1.07-1.22) 27 (0-61) 5.04e-05
rs28639727 chr4:698678 PCGF3 [-859bp] All: C 105,041 14 T vs. C 0.092 (T) 0.067 (T) 1.15 (1.08-1.24) 28 (0-62) 5.14e-05
rs75261937 chr4:784833 CPLX1 All: C 108,990 15 C vs. T 0.092 (C) 0.117 (C) 1.14 (1.07-1.21) 28 (0-61) 5.33e-05
rs4690297 chr4:732299 PCGF3 All: C 108,990 15 A vs. G 0.083 (A) 0.058 (A) 1.12 (1.06-1.18) 17 (0-55) 5.64e-05

Association studies for this region [+]