CPLX1, chr4:778745-819986 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11732965 chr4:869359 GAK All: C 108,990 15 A vs. C 0.117 (A) 0.092 (A) 1.23 (1.17-1.29) 39 (0-67) 3.89e-17
Meta_image?name=rs11732965

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1811560 chr4:763229 PCGF3 All: C 108,990 15 T vs. C - - 0.88 (0.83-0.93) 31 (0-63) 6.76e-06
rs62294083 chr4:765545 PCGF3 [+1117bp] All: C 108,990 15 T vs. C 0.092 (T) 0.092 (T) 1.14 (1.08-1.20) 28 (0-61) 6.92e-06
rs73058497 chr4:768647 PCGF3 [+4219bp] All: C 108,990 15 G vs. A 0.092 (G) 0.092 (G) 1.14 (1.08-1.20) 30 (0-62) 7.19e-06
rs62294061 chr4:750296 PCGF3 All: C 108,990 15 T vs. C 0.083 (T) 0.058 (T) 1.14 (1.08-1.21) 28 (0-61) 7.73e-06
rs11734742 chr4:821565 CPLX1 [+1579bp] C - 13 T vs. C 0.1 (T) 0.108 (T) >1 (-) 57 (-) <1.00e-04
rs77937203 chr4:749620 PCGF3 All: C 101,770 13 T vs. G - - 1.27 (1.15-1.42) 47 (0-72) 8.33e-06
rs62294124 chr4:772667 CPLX1 [-6078bp] All: C 108,990 15 A vs. G 0.092 (A) 0.092 (A) 1.14 (1.08-1.20) 31 (0-63) 8.57e-06
rs62294125 chr4:775498 CPLX1 [-3247bp] All: C 108,990 15 A vs. G 0.1 (A) 0.117 (A) 1.14 (1.07-1.20) 31 (0-63) 9.38e-06
rs3775148 chr4:785443 CPLX1 All: C 108,990 15 T vs. C 0.083 (T) 0.075 (T) 1.14 (1.07-1.20) 30 (0-62) 1.02e-05
rs62294129 chr4:784176 CPLX1 All: C 108,990 15 C vs. T 0.092 (C) 0.067 (C) 1.14 (1.07-1.20) 31 (0-63) 1.13e-05
rs62294130 chr4:784879 CPLX1 All: C 108,990 15 A vs. G 0.075 (A) 0.108 (A) 1.14 (1.07-1.20) 32 (0-63) 1.37e-05
rs11735877 chr4:780083 CPLX1 All: C 108,990 15 A vs. G 0.175 (A) - 0.91 (0.87-0.95) 6 (0-57) 1.52e-05
rs2306244 chr4:862502 GAK All: C 108,990 15 C vs. T 0.15 (C) 0.317 (C) 1.10 (1.05-1.14) 16 (0-53) 1.60e-05
rs73207782 chr4:848764 GAK C - 13 C vs. G 0.292 (C) 0.058 (C) <1 (-) 0 (-) <1.00e-04
rs73207791 chr4:865941 GAK All: C 108,990 15 G vs. A 0.158 (G) 0.275 (G) 1.09 (1.05-1.14) 15 (0-52) 1.76e-05
rs4234854 chr4:756271 PCGF3 C - 13 C vs. G 0.217 (C) 0.167 (C) >1 (-) 0 (-) <1.00e-04
rs4690339 chr4:854712 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.275 (C) 1.09 (1.05-1.14) 18 (0-55) 2.08e-05
rs6838241 chr4:756686 PCGF3 C - 13 A vs. C 0.217 (C) 0.183 (C) <1 (-) 0 (-) <1.00e-04
rs4690336 chr4:867242 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.275 (T) 1.09 (1.05-1.14) 11 (0-48) 2.63e-05
rs7376690 chr4:813726 CPLX1 All: C 108,990 15 G vs. A 0.425 (G) 0.3 (G) 0.93 (0.91-0.96) 0 (0-23) 2.68e-05
rs11248044 chr4:815321 CPLX1 All: C 108,990 15 G vs. A 0.342 (G) 0.467 (A) 1.07 (1.04-1.11) 17 (0-55) 3.01e-05
rs4690299 chr4:741473 PCGF3 All: C 105,041 14 C vs. T - - 1.09 (1.05-1.14) 46 (0-71) 3.09e-05
rs7687101 chr4:812679 CPLX1 All: C 108,990 15 T vs. G 0.442 (T) 0.292 (T) 0.94 (0.91-0.97) 0 (0-27) 3.20e-05
rs11248042 chr4:812598 CPLX1 All: C 108,990 15 C vs. T 0.35 (C) 0.458 (T) 1.07 (1.04-1.11) 21 (0-57) 3.31e-05
rs73207790 chr4:865430 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.275 (A) 1.09 (1.05-1.14) 12 (0-50) 3.39e-05
rs73060334 chr4:787517 CPLX1 All: C 108,990 15 A vs. G 0.1 (A) 0.092 (A) 1.12 (1.06-1.18) 8 (0-45) 3.65e-05
rs73060336 chr4:787845 CPLX1 All: C 108,990 15 T vs. C 0.092 (T) 0.092 (T) 1.12 (1.06-1.18) 8 (0-45) 3.65e-05
rs6599376 chr4:790222 CPLX1 All: C 108,990 15 C vs. T - - 0.89 (0.85-0.94) 7 (0-43) 3.99e-05
rs75422798 chr4:773092 CPLX1 [-5653bp] All: C 108,990 15 A vs. G 0.1 (A) 0.092 (A) 1.14 (1.07-1.22) 25 (0-60) 4.27e-05
rs3775144 chr4:785105 CPLX1 All: C 105,041 14 T vs. C 0.058 (T) - 1.15 (1.07-1.23) 34 (0-65) 4.40e-05
rs77209954 chr4:770065 PCGF3 [+5637bp] All: C 105,041 14 T vs. G 0.1 (T) 0.108 (T) 1.14 (1.07-1.22) 30 (0-63) 4.47e-05
rs75811058 chr4:754675 PCGF3 All: C 105,041 14 T vs. C 0.092 (T) - 1.14 (1.07-1.22) 26 (0-61) 4.51e-05
rs12644402 chr4:759449 PCGF3 All: C 105,041 14 T vs. C 0.092 (T) 0.108 (T) 1.14 (1.07-1.22) 27 (0-61) 4.63e-05
rs12642051 chr4:759406 PCGF3 All: C 105,041 14 A vs. G 0.1 (A) 0.108 (A) 1.14 (1.07-1.22) 26 (0-61) 4.99e-05
rs77684775 chr4:782254 CPLX1 All: C 108,990 15 T vs. C 0.1 (T) 0.075 (T) 1.14 (1.07-1.22) 27 (0-61) 5.04e-05
rs7684266 chr4:856609 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.275 (C) 1.09 (1.05-1.14) 14 (0-52) 5.13e-05
rs75261937 chr4:784833 CPLX1 All: C 108,990 15 C vs. T 0.092 (C) 0.117 (C) 1.14 (1.07-1.21) 28 (0-61) 5.33e-05
rs12509561 chr4:850701 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.267 (T) 1.09 (1.05-1.14) 14 (0-52) 5.51e-05
rs4690340 chr4:848280 GAK All: C 108,990 15 T vs. G 0.158 (T) 0.267 (T) 1.09 (1.05-1.14) 14 (0-52) 5.55e-05
rs4690297 chr4:732299 PCGF3 All: C 108,990 15 A vs. G 0.083 (A) 0.058 (A) 1.12 (1.06-1.18) 17 (0-55) 5.64e-05
rs2335172 chr4:855282 GAK All: C 108,990 15 A vs. G 0.158 (A) - 1.09 (1.04-1.13) 16 (0-53) 5.69e-05
rs28624826 chr4:757758 PCGF3 All: C 105,041 14 T vs. C 0.1 (T) 0.1 (T) 1.14 (1.07-1.22) 25 (0-60) 5.73e-05
rs2279175 chr4:852013 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.267 (A) 1.09 (1.04-1.14) 14 (0-52) 5.85e-05
rs2061846 chr4:852484 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 1.09 (1.04-1.13) 15 (0-53) 6.00e-05
rs73058499 chr4:768978 PCGF3 [+4550bp] All: C 108,990 15 C vs. T 0.092 (C) 0.075 (C) 1.14 (1.07-1.21) 19 (0-56) 6.13e-05
rs17165051 chr4:813428 CPLX1 All: C 108,990 15 T vs. G 0.425 (T) 0.267 (T) 0.94 (0.91-0.97) 0 (0-35) 6.23e-05
rs56307842 chr4:854232 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.25 (C) 1.09 (1.04-1.13) 15 (0-52) 6.47e-05
rs17165087 chr4:845841 GAK All: C 108,990 15 T vs. C 0.167 (T) 0.3 (T) 1.09 (1.05-1.14) 16 (0-53) 6.49e-05
rs76638961 chr4:831852 GAK [-11212bp] All: C 105,041 14 C vs. A 0.042 (C) - 0.81 (0.73-0.90) 49 (5-72) 7.31e-05
rs3733353 chr4:861439 GAK All: C 108,990 15 A vs. G 0.15 (A) 0.275 (A) 1.09 (1.04-1.13) 13 (0-51) 8.41e-05

Association studies for this region [+]