CPLX1, chr4:778745-819986 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11732965 chr4:869359 GAK All: C 108,990 15 A vs. C 0.117 (A) 0.092 (A) 1.23 (1.17-1.29) 39 (0-67) 3.89e-17
Meta_image?name=rs11732965

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13151247 chr4:784142 CPLX1 C - 13 C vs. G 0.283 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs13105255 chr4:784322 CPLX1 C - 13 T vs. C 0.283 (T) 0.208 (T) >1 (-) 0 (-) <0.05
rs13105473 chr4:784425 CPLX1 C - 13 C vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs13105702 chr4:784503 CPLX1 C - 13 C vs. G 0.283 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs6811216 chr4:782940 CPLX1 C - 13 A vs. G 0.275 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs7376403 chr4:743125 PCGF3 C - 12 A vs. T - - >1 (-) 40 (-) <0.05
rs13122480 chr4:784546 CPLX1 C - 13 T vs. C 0.292 (C) 0.2 (C) <1 (-) 0 (-) <0.05
rs73207767 chr4:824489 CPLX1 [+4503bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs7683551 chr4:768441 PCGF3 [+4013bp] C - 13 T vs. C 0.275 (C) 0.183 (C) <1 (-) 0 (-) <0.05
rs59438465 chr4:752276 PCGF3 C - 13 T vs. C 0.367 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs10155482 chr4:816921 CPLX1 C - 13 A vs. C 0.383 (C) 0.217 (C) >1 (-) 0 (-) <0.05
rs6842106 chr4:816304 CPLX1 C - 13 C vs. G 0.383 (G) 0.2 (G) >1 (-) 0 (-) <0.05
rs28497436 chr4:756045 PCGF3 All: C 108,990 15 C vs. T 0.275 (C) 0.167 (C) 1.06 (1.02-1.10) 0 (0-52) 8.12e-04
rs11942504 chr4:817486 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs6817287 chr4:815856 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs58854368 chr4:821421 CPLX1 [+1435bp] C - 13 T vs. G 0.383 (G) 0.208 (G) >1 (-) 0 (-) <0.05
rs6599383 chr4:814605 CPLX1 C - 13 T vs. C 0.375 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs7378189 chr4:823304 CPLX1 [+3318bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs7677842 chr4:730385 PCGF3 C - 12 T vs. C - - <1 (-) 47 (-) <0.05
rs2276906 chr4:818440 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7375209 chr4:815039 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7376916 chr4:823743 CPLX1 [+3757bp] C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7378224 chr4:823629 CPLX1 [+3643bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs6599381 chr4:814313 CPLX1 C - 13 T vs. G 0.375 (T) 0.208 (T) <1 (-) 5 (-) <0.05
rs28437588 chr4:816646 CPLX1 C - 13 T vs. G 0.383 (G) 0.208 (G) >1 (-) 0 (-) <0.05
rs6599382 chr4:814404 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 5 (-) <0.05
rs12504575 chr4:813438 CPLX1 C - 13 A vs. G 0.425 (A) 0.3 (A) <1 (-) 0 (-) <0.05
rs6599380 chr4:812414 CPLX1 C - 13 T vs. C 0.375 (T) 0.208 (T) <1 (-) 6 (-) <0.05
rs7686544 chr4:812417 CPLX1 C - 13 A vs. G 0.367 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs9328757 chr4:809593 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs10004503 chr4:793929 CPLX1 C - 12 T vs. C 0.1 (T) 0.108 (T) >1 (-) 42 (-) <0.05
rs28699255 chr4:826998 CPLX1 [+7012bp] C - 13 A vs. G 0.342 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs114503621 chr4:730272 PCGF3 C - 13 T vs. C 0.3 (C) - >1 (-) 12 (-) <0.05
rs76984010 chr4:794832 CPLX1 C - 12 A vs. G - - >1 (-) 41 (-) <0.05
rs77052907 chr4:733630 PCGF3 C - 12 A vs. G - 0.033 (A) >1 (-) 22 (-) <0.05
rs1078140 chr4:828426 CPLX1 [+8440bp] C - 13 T vs. C 0.375 (T) 0.183 (T) <1 (-) 0 (-) <0.05
rs28669103 chr4:825719 CPLX1 [+5733bp] C - 13 T vs. C 0.175 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs149813422 chr4:730283 PCGF3 C - 13 T vs. C - - <1 (-) 9 (-) <0.05
rs11723514 chr4:788722 CPLX1 C - 13 A vs. G 0.308 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs35333201 chr4:757944 PCGF3 All: C 108,990 15 C vs. T 0.283 (C) 0.208 (C) 1.05 (1.02-1.09) 0 (0-46) 0.003
rs13131185 chr4:784116 CPLX1 All: C 108,990 15 A vs. G 0.275 (A) 0.208 (A) 1.05 (1.02-1.09) 0 (0-51) 0.003
rs13147679 chr4:776489 CPLX1 [-2256bp] All: C 108,990 15 G vs. A 0.275 (G) 0.225 (G) 1.05 (1.02-1.09) 0 (0-51) 0.003
rs4690281 chr4:753944 PCGF3 C - 12 A vs. G 0.383 (A) 0.317 (A) <1 (-) 0 (-) <0.05
rs62294151 chr4:791403 CPLX1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs147200445 chr4:773523 CPLX1 [-5222bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs62295465 chr4:833585 GAK [-9479bp] C - 12 A vs. T 0.058 (T) - <1 (-) 0 (-) <0.05
rs2242237 chr4:779394 CPLX1 All: C 108,990 15 G vs. A 0.275 (G) 0.2 (G) 1.05 (1.01-1.09) 0 (0-51) 0.005
rs62295468 chr4:840765 GAK [-2299bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs11735356 chr4:849651 GAK C - 4 A vs. G - - >1 (-) 14 (-) <0.05
rs3775141 chr4:783230 CPLX1 C - 13 A vs. C 0.433 (A) 0.317 (C) >1 (-) 5 (-) <0.05

Association studies for this region [+]