CPLX1, chr4:778745-819986 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11732965 chr4:869359 GAK All: C 108,990 15 A vs. C 0.117 (A) 0.092 (A) 1.23 (1.17-1.29) 39 (0-67) 3.89e-17
Meta_image?name=rs11732965

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4690313 chr4:780883 CPLX1 C - 13 A vs. C 0.217 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs76643823 chr4:828050 CPLX1 [+8064bp] C - 12 A vs. G 0.083 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs7377314 chr4:768414 PCGF3 [+3986bp] C - 13 T vs. C 0.242 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs10902759 chr4:787479 CPLX1 C - 13 T vs. C 0.217 (T) 0.35 (T) <1 (-) 0 (-) >0.05
rs59898624 chr4:810507 CPLX1 C - 12 A vs. G 0.067 (A) 0.258 (A) <1 (-) 5 (-) >0.05
rs12511420 chr4:815804 CPLX1 C - 13 A vs. G 0.4 (G) 0.242 (G) >1 (-) 2 (-) >0.05
rs77092940 chr4:831561 GAK [-11503bp] C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs79188260 chr4:824565 CPLX1 [+4579bp] C - 6 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs6823876 chr4:753807 PCGF3 C - 13 T vs. C 0.217 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs10471248 chr4:825534 CPLX1 [+5548bp] C - 13 A vs. G 0.45 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs79565855 chr4:826725 CPLX1 [+6739bp] C - 12 A vs. G 0.083 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs11248043 chr4:812753 CPLX1 C - 12 A vs. G 0.175 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs62294153 chr4:794293 CPLX1 C - 12 T vs. C - - >1 (-) 3 (-) >0.05
rs56148616 chr4:751282 PCGF3 C - 12 T vs. C 0.108 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs114066161 chr4:825635 CPLX1 [+5649bp] C - 12 A vs. G 0.083 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs3733351 chr4:861628 GAK C - 13 T vs. C 0.417 (T) 0.475 (T) <1 (-) 23 (-) >0.05
rs59949279 chr4:778202 CPLX1 [-543bp] C - 12 T vs. C 0.05 (T) 0.217 (T) >1 (-) 23 (-) >0.05
rs59710573 chr4:823093 CPLX1 [+3107bp] C - 12 C vs. G 0.083 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs936551 chr4:821490 CPLX1 [+1504bp] C - 13 A vs. G 0.433 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs11248047 chr4:821553 CPLX1 [+1567bp] C - 13 A vs. G 0.433 (A) 0.442 (A) >1 (-) 0 (-) >0.05
rs11734954 chr4:824332 CPLX1 [+4346bp] C - 13 A vs. G 0.442 (G) 0.442 (G) <1 (-) 0 (-) >0.05
rs11721731 chr4:824438 CPLX1 [+4452bp] C - 13 T vs. C 0.442 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs7656533 chr4:824755 CPLX1 [+4769bp] C - 13 T vs. C 0.433 (C) 0.442 (C) <1 (-) 0 (-) >0.05
rs11933159 chr4:824604 CPLX1 [+4618bp] C - 13 T vs. C 0.433 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs7665967 chr4:824845 CPLX1 [+4859bp] C - 13 A vs. G 0.442 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs4690318 chr4:824976 CPLX1 [+4990bp] C - 13 A vs. G 0.433 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs10471247 chr4:825452 CPLX1 [+5466bp] C - 13 T vs. C 0.433 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs4690320 chr4:825370 CPLX1 [+5384bp] C - 13 T vs. C 0.433 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs11725777 chr4:826014 CPLX1 [+6028bp] C - 13 T vs. C 0.45 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs2335171 chr4:749863 PCGF3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs115071561 chr4:787322 CPLX1 C - 4 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs11931773 chr4:828772 CPLX1 [+8786bp] C - 13 C vs. G 0.142 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs3775147 chr4:785296 CPLX1 C - 13 C vs. G 0.367 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs9998888 chr4:824575 CPLX1 [+4589bp] C - 13 T vs. C 0.442 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs6599384 chr4:822706 CPLX1 [+2720bp] C - 13 T vs. C 0.433 (T) 0.45 (T) >1 (-) 0 (-) >0.05
rs75591064 chr4:801424 CPLX1 C - 12 A vs. G 0.025 (A) - <1 (-) 16 (-) >0.05
rs11724697 chr4:825990 CPLX1 [+6004bp] C - 13 A vs. G 0.433 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs4690319 chr4:824988 CPLX1 [+5002bp] C - 13 A vs. G 0.433 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs77853873 chr4:822957 CPLX1 [+2971bp] C - 12 A vs. G 0.083 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs28416002 chr4:826044 CPLX1 [+6058bp] C - 13 T vs. C 0.442 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs117356246 chr4:819328 CPLX1 C - 12 C vs. G - 0.242 (G) >1 (-) 5 (-) >0.05
rs6599374 chr4:750212 PCGF3 C - 13 T vs. G 0.242 (T) - <1 (-) 0 (-) >0.05
rs59157526 chr4:785818 CPLX1 C - 13 A vs. G 0.092 (A) 0.083 (A) >1 (-) 0 (-) >0.05
rs17165126 chr4:869446 GAK C - 12 C vs. G 0.008 (C) - <1 (-) 0 (-) >0.05
rs77762673 chr4:842121 GAK [-943bp] C - 8 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs74469192 chr4:815640 CPLX1 C - 12 C vs. G 0.083 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs6818983 chr4:767524 PCGF3 [+3096bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6834724 chr4:767616 PCGF3 [+3188bp] C - 13 A vs. T 0.125 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs28649762 chr4:776649 CPLX1 [-2096bp] C - 13 A vs. C - - <1 (-) 1 (-) >0.05
rs11248050 chr4:854409 GAK C - 13 T vs. C 0.358 (T) 0.242 (T) <1 (-) 26 (-) >0.05

Association studies for this region [+]