CPT2, chr1:53662101-53679869 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79901635 chr1:53639682 CPT2 [-22419bp] C - 9 T vs. C 0.025 (T) - >1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79901635 chr1:53639682 CPT2 [-22419bp] C - 9 T vs. C 0.025 (T) - >1 (-) 0 (-) <1.00e-04
rs72895329 chr1:53720574 LRP8 C - 13 A vs. G 0.117 (A) 0.017 (A) >1 (-) 0 (-) <0.05
rs7531337 chr1:53641911 CPT2 [-20190bp] C - 13 A vs. C 0.258 (A) 0.258 (A) >1 (-) 13 (-) <0.05
rs11576903 chr1:53652962 CPT2 [-9139bp] C - 13 A vs. G 0.275 (G) - <1 (-) 9 (-) <0.05
rs11590250 chr1:53652951 CPT2 [-9150bp] C - 13 T vs. C 0.275 (C) - <1 (-) 9 (-) <0.05
rs10888774 chr1:53644036 CPT2 [-18065bp] C - 13 T vs. C 0.258 (C) 0.225 (C) <1 (-) 12 (-) <0.05
rs6702638 chr1:53614901 SLC1A7 [+6612bp] C - 11 T vs. C 0.008 (C) - <1 (-) 0 (-) <0.05
rs72673121 chr1:53662823 CPT2 C - 13 A vs. C 0.192 (A) 0.05 (A) >1 (-) 2 (-) <0.05
rs1799822 chr1:53679229 CPT2 C - 13 A vs. G 0.192 (G) 0.1 (G) <1 (-) 8 (-) <0.05
rs1134688 chr1:53681699 C1orf123 C - 13 T vs. G 0.208 (G) 0.083 (G) <1 (-) 1 (-) <0.05
rs11578832 chr1:53674542 CPT2 C - 13 A vs. G 0.192 (A) 0.1 (A) >1 (-) 2 (-) <0.05
rs11581518 chr1:53672028 CPT2 C - 13 A vs. G 0.192 (G) 0.1 (G) <1 (-) 6 (-) <0.05
rs34481291 chr1:53634468 SLC1A7 [+26179bp] C - 13 A vs. C - - >1 (-) 0 (-) <0.05
rs13375749 chr1:53695882 MAGOH C - 13 T vs. C 0.2 (C) 0.125 (C) <1 (-) 0 (-) <0.05
rs77135199 chr1:53653934 CPT2 [-8167bp] C - 9 T vs. G 0.017 (T) - <1 (-) 0 (-) <0.05
rs6588472 chr1:53700170 MAGOH C - 13 T vs. C - - <1 (-) 2 (-) <0.05
rs6677126 chr1:53706829 MAGOH [+2547bp] C - 13 T vs. C 0.308 (C) 0.1 (C) >1 (-) 8 (-) >0.05
rs7555894 chr1:53690512 MAGOH [-2052bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1679913 chr1:53686383 C1orf123 [+94bp] C - 13 C vs. G 0.3 (C) 0.075 (C) <1 (-) 16 (-) >0.05
rs144089126 chr1:53671466 CPT2 C - 5 T vs. C - - <1 (-) 18 (-) >0.05
rs370493 chr1:53675049 CPT2 C - 13 A vs. G 0.283 (G) 0.058 (G) >1 (-) 16 (-) >0.05
rs6673692 chr1:53697139 MAGOH C - 13 A vs. G 0.442 (A) 0.417 (A) <1 (-) 0 (-) >0.05
rs10788950 chr1:53713336 LRP8 C - 13 A vs. G 0.308 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs4926962 chr1:53638218 CPT2 [-23883bp] C - 13 T vs. C 0.317 (T) 0.417 (C) <1 (-) 0 (-) >0.05
rs6689888 chr1:53620833 SLC1A7 [+12544bp] C - 13 T vs. C 0.175 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs12039029 chr1:53623735 SLC1A7 [+15446bp] C - 13 T vs. C 0.175 (C) 0.225 (C) >1 (-) 0 (-) >0.05
rs113652876 chr1:53614388 SLC1A7 [+6099bp] C - 12 A vs. G 0.05 (A) - <1 (-) 39 (-) >0.05
rs12049296 chr1:53623662 SLC1A7 [+15373bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6666580 chr1:53623564 SLC1A7 [+15275bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs113755833 chr1:53657106 CPT2 [-4995bp] C - 6 A vs. G - 0.192 (A) >1 (-) 0 (-) >0.05
rs75855227 chr1:53613779 SLC1A7 [+5490bp] C - 13 T vs. C 0.167 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs6588473 chr1:53729536 LRP8 C - 13 T vs. C 0.292 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs6688253 chr1:53639661 CPT2 [-22440bp] C - 13 T vs. C 0.267 (C) 0.425 (T) >1 (-) 0 (-) >0.05
rs3125254 chr1:53637740 CPT2 [-24361bp] C - 13 T vs. C 0.267 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs11206125 chr1:53671036 CPT2 C - 13 A vs. C 0.442 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs7554022 chr1:53660993 CPT2 [-1108bp] C - 13 A vs. C 0.442 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs12029288 chr1:53617475 SLC1A7 [+9186bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3125253 chr1:53637106 CPT2 [-24995bp] C - 13 T vs. C 0.267 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs6684231 chr1:53635244 CPT2 [-26857bp] C - 13 A vs. C 0.267 (A) 0.458 (C) <1 (-) 0 (-) >0.05
rs12033100 chr1:53617840 SLC1A7 [+9551bp] C - 13 T vs. C 0.167 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs4543741 chr1:53636177 CPT2 [-25924bp] C - 13 C vs. G 0.267 (G) 0.458 (C) >1 (-) 0 (-) >0.05
rs7539949 chr1:53672270 CPT2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs3102045 chr1:53646540 CPT2 [-15561bp] C - 13 A vs. T 0.242 (T) 0.442 (A) >1 (-) 0 (-) >0.05
rs737464 chr1:53678554 CPT2 C - 13 A vs. G 0.458 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs141901639 chr1:53705142 MAGOH [+860bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs3102044 chr1:53646557 CPT2 [-15544bp] C - 13 T vs. C 0.25 (C) 0.442 (T) >1 (-) 0 (-) >0.05
rs2046140 chr1:53632424 SLC1A7 [+24135bp] C - 13 A vs. G 0.167 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs10888775 chr1:53644093 CPT2 [-18008bp] C - 13 A vs. T 0.267 (T) 0.408 (A) >1 (-) 0 (-) >0.05
rs3102046 chr1:53640580 CPT2 [-21521bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2046138 chr1:53665612 CPT2 C - 13 A vs. G 0.433 (G) 0.15 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.