FAM159A, chr1:53099016-53135355 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6679249 chr1:53050461 GPX7 [-17583bp] C - 13 A vs. G 0.133 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6679249 chr1:53050461 GPX7 [-17583bp] C - 13 A vs. G 0.133 (A) - >1 (-) 0 (-) <0.05
rs34275176 chr1:53056063 GPX7 [-11981bp] C - 13 A vs. G 0.133 (G) - <1 (-) 0 (-) <0.05
rs111730795 chr1:53165593 COA7 [+1555bp] C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs11591099 chr1:53056597 GPX7 [-11447bp] C - 12 A vs. G 0.142 (G) - <1 (-) 0 (-) <0.05
rs1679857 chr1:53182822 ZYG11B [-9304bp] C - 13 A vs. G 0.05 (A) - >1 (-) 0 (-) <0.05
rs835343 chr1:53064116 GPX7 [-3928bp] C - 13 A vs. G 0.283 (A) - >1 (-) 11 (-) <0.05
rs141524857 chr1:53183877 ZYG11B [-8249bp] C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs112258931 chr1:53160192 COA7 C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs150063834 chr1:53160835 COA7 C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs3753753 chr1:53069514 GPX7 C - 13 C vs. G 0.292 (C) 0.167 (C) >1 (-) 11 (-) <0.05
rs143701107 chr1:53172624 COA7 [+8586bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs1416093 chr1:53067034 GPX7 [-1010bp] C - 13 T vs. C 0.292 (T) 0.167 (T) >1 (-) 11 (-) <0.05
rs835337 chr1:53059106 GPX7 [-8938bp] C - 13 A vs. G 0.283 (A) 0.167 (A) >1 (-) 15 (-) <0.05
rs143290537 chr1:53177942 COA7 [+13904bp] C - 11 T vs. G - - >1 (-) 0 (-) <0.05
rs139906907 chr1:53177369 COA7 [+13331bp] C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs12407301 chr1:53103781 FAM159A C - 13 T vs. G 0.058 (G) - >1 (-) 0 (-) <0.05
rs141943860 chr1:53180156 ZYG11B [-11970bp] C - 11 C vs. G - - <1 (-) 0 (-) <0.05
rs1970949 chr1:53072796 GPX7 C - 13 C vs. G 0.292 (G) 0.175 (G) <1 (-) 7 (-) <0.05
rs835338 chr1:53061766 GPX7 [-6278bp] C - 13 A vs. G 0.283 (A) 0.167 (A) >1 (-) 12 (-) <0.05
rs139598438 chr1:53165898 COA7 [+1860bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs1970950 chr1:53072741 GPX7 C - 13 A vs. G 0.283 (A) 0.175 (A) >1 (-) 9 (-) <0.05
rs835335 chr1:53057483 GPX7 [-10561bp] C - 13 A vs. G - - >1 (-) 11 (-) <0.05
rs665431 chr1:53138444 FAM159A [+3089bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs150542278 chr1:53091294 FAM159A [-7722bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs6672470 chr1:53085337 GPX7 [+10614bp] C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) <0.05
rs835347 chr1:53053763 GPX7 [-14281bp] C - 13 T vs. C 0.275 (C) 0.167 (C) <1 (-) 15 (-) <0.05
rs11205977 chr1:53068093 GPX7 C - 13 T vs. G 0.075 (T) - >1 (-) 0 (-) <0.05
rs113940062 chr1:53089250 FAM159A [-9766bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs11583321 chr1:53094695 FAM159A [-4321bp] C - 13 A vs. T 0.083 (A) - >1 (-) 0 (-) <0.05
rs7526233 chr1:53090501 FAM159A [-8515bp] C - 13 A vs. C 0.083 (A) - >1 (-) 0 (-) <0.05
rs11581211 chr1:53090921 FAM159A [-8095bp] C - 13 T vs. G 0.083 (G) - <1 (-) 0 (-) <0.05
rs7537727 chr1:53090345 FAM159A [-8671bp] C - 13 A vs. T 0.075 (T) - <1 (-) 0 (-) <0.05
rs7512753 chr1:53093707 FAM159A [-5309bp] C - 13 A vs. G 0.083 (A) - >1 (-) 0 (-) <0.05
rs11585624 chr1:53095582 FAM159A [-3434bp] C - 13 A vs. G 0.083 (G) - <1 (-) 0 (-) <0.05
rs80232329 chr1:53097509 FAM159A [-1507bp] C - 13 A vs. G 0.083 (G) - <1 (-) 0 (-) <0.05
rs74443674 chr1:53098685 FAM159A [-331bp] C - 13 A vs. G 0.083 (A) - >1 (-) 0 (-) <0.05
rs114150764 chr1:53098891 FAM159A [-125bp] C - 13 T vs. C 0.083 (T) - >1 (-) 0 (-) <0.05
rs669219 chr1:53101549 FAM159A C - 13 C vs. G 0.083 (C) - >1 (-) 0 (-) <0.05
rs11583225 chr1:53103042 FAM159A C - 13 C vs. G 0.083 (C) - >1 (-) 0 (-) <0.05
rs946154 chr1:53073327 GPX7 C - 13 C vs. G 0.392 (G) 0.192 (G) <1 (-) 0 (-) <0.05
rs11585316 chr1:53103624 FAM159A C - 13 T vs. G 0.083 (G) - <1 (-) 0 (-) <0.05
rs35915506 chr1:53074975 GPX7 [+252bp] C - 13 C vs. G - - >1 (-) 6 (-) <0.05
rs11583834 chr1:53104261 FAM159A C - 13 A vs. G 0.083 (A) - >1 (-) 0 (-) <0.05
rs11590859 chr1:53073838 GPX7 C - 13 T vs. G 0.075 (T) - >1 (-) 3 (-) <0.05
rs34019243 chr1:53070377 GPX7 C - 11 T vs. C 0.05 (T) - <1 (-) 14 (-) <0.05
rs34087138 chr1:53083567 GPX7 [+8844bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) <0.05
rs12738012 chr1:53082370 GPX7 [+7647bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs6686035 chr1:53080008 GPX7 [+5285bp] C - 13 T vs. G 0.075 (G) - <1 (-) 0 (-) <0.05
rs12058587 chr1:53080743 GPX7 [+6020bp] C - 13 T vs. G - - >1 (-) 0 (-) <0.05
rs142418069 chr1:53117066 FAM159A C - 8 A vs. G - - >1 (-) 0 (-) <0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.