FAM179A, chr2:29179477-29284239 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56237105 chr2:29174213 WDR43 [+3125bp] C - 13 T vs. C 0.425 (T) 0.067 (T) >1 (-) 40 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2019232 chr2:29258013 FAM179A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs75276619 chr2:29295186 C2orf71 C - 7 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs6724450 chr2:29180115 FAM179A C - 13 A vs. G 0.108 (A) 0.342 (G) <1 (-) 1 (-) >0.05
rs7585244 chr2:29283509 FAM179A C - 13 T vs. C 0.075 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs57005658 chr2:29242539 FAM179A C - 13 T vs. G 0.233 (G) 0.125 (G) <1 (-) 52 (-) >0.05
rs12620470 chr2:29327625 CLIP4 C - 13 C vs. G 0.075 (G) 0.425 (G) <1 (-) 47 (-) >0.05
rs7598888 chr2:29320680 CLIP4 C - 13 A vs. G 0.142 (A) - >1 (-) 57 (-) >0.05
rs144965403 chr2:29312569 CLIP4 [-8002bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs3936096 chr2:29195090 FAM179A C - 13 C vs. G 0.367 (G) 0.383 (C) >1 (-) 0 (-) >0.05
rs1026044 chr2:29266459 FAM179A C - 13 A vs. G 0.292 (A) 0.042 (A) >1 (-) 16 (-) >0.05
rs74444058 chr2:29220299 FAM179A C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs138039407 chr2:29157211 WDR43 C - 7 C vs. G - - >1 (-) 29 (-) >0.05
rs17007554 chr2:29297758 C2orf71 [+631bp] C - 13 T vs. C 0.267 (T) 0.317 (T) <1 (-) 6 (-) >0.05
rs12623297 chr2:29226512 FAM179A C - 13 A vs. G 0.175 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs34360803 chr2:29291931 C2orf71 C - 13 A vs. G 0.25 (A) 0.192 (A) >1 (-) 44 (-) >0.05
rs72788189 chr2:29286031 C2orf71 C - 13 T vs. C - - <1 (-) 25 (-) >0.05
rs111869224 chr2:29328182 CLIP4 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs11675600 chr2:29290893 C2orf71 C - 9 C vs. G 0.017 (C) - <1 (-) 0 (-) >0.05
rs139389624 chr2:29284316 C2orf71 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs62130298 chr2:29244889 FAM179A C - 13 A vs. C 0.225 (C) 0.083 (C) <1 (-) 50 (-) >0.05
rs4666158 chr2:29198213 FAM179A C - 13 T vs. C - - <1 (-) 28 (-) >0.05
rs6742719 chr2:29230555 FAM179A C - 13 A vs. C 0.183 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs4398230 chr2:29167722 WDR43 C - 12 T vs. C 0.342 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs72857413 chr2:29201797 FAM179A C - 13 A vs. G 0.133 (A) 0.133 (A) <1 (-) 8 (-) >0.05
rs10495767 chr2:29287192 C2orf71 C - 13 A vs. G 0.242 (A) 0.2 (A) >1 (-) 37 (-) >0.05
rs6761060 chr2:29230879 FAM179A C - 13 T vs. C 0.183 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs921098 chr2:29270602 FAM179A C - 13 C vs. G 0.467 (G) 0.267 (C) >1 (-) 55 (-) >0.05
rs4464230 chr2:29140170 WDR43 C - 13 A vs. G 0.342 (A) 0.083 (A) <1 (-) 9 (-) >0.05
rs6757697 chr2:29230611 FAM179A C - 13 A vs. T 0.192 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs7571686 chr2:29202192 FAM179A C - 13 A vs. G 0.417 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs76644848 chr2:29327025 CLIP4 C - 8 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs117699821 chr2:29261966 FAM179A C - 3 T vs. C - 0.042 (T) <1 (-) 0 (-) >0.05
rs7423095 chr2:29161763 WDR43 C - 13 A vs. G 0.075 (A) 0.083 (A) <1 (-) 38 (-) >0.05
rs4476310 chr2:29204230 FAM179A C - 13 A vs. C 0.142 (A) 0.125 (A) <1 (-) 22 (-) >0.05
rs150491034 chr2:29232857 FAM179A C - 12 A vs. G - - <1 (-) 44 (-) >0.05
rs144569618 chr2:29294239 C2orf71 C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs6754680 chr2:29171964 WDR43 [+876bp] C - 13 A vs. G 0.075 (A) 0.083 (A) <1 (-) 41 (-) >0.05
rs4233731 chr2:29161010 WDR43 C - 13 A vs. G 0.075 (G) 0.083 (G) >1 (-) 37 (-) >0.05
rs73922944 chr2:29242914 FAM179A C - 13 T vs. G 0.225 (G) - <1 (-) 47 (-) >0.05
rs6753936 chr2:29223669 FAM179A C - 13 T vs. C 0.158 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs12475073 chr2:29174717 WDR43 [+3629bp] C - 13 C vs. G 0.083 (C) 0.083 (C) <1 (-) 41 (-) >0.05
rs148988602 chr2:29179265 FAM179A [-212bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs4586599 chr2:29199582 FAM179A C - 13 T vs. C 0.408 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs17744052 chr2:29289411 C2orf71 C - 13 A vs. G 0.242 (G) 0.192 (G) <1 (-) 42 (-) >0.05
rs35904647 chr2:29289703 C2orf71 C - 13 A vs. G 0.242 (A) 0.192 (A) >1 (-) 42 (-) >0.05
rs4538160 chr2:29167833 WDR43 C - 13 T vs. C 0.075 (T) 0.083 (T) <1 (-) 40 (-) >0.05
rs11694008 chr2:29327012 CLIP4 C - 13 A vs. G 0.075 (G) 0.342 (G) <1 (-) 49 (-) >0.05
rs12989882 chr2:29227124 FAM179A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs141363874 chr2:29139986 WDR43 C - 9 C vs. G - - >1 (-) 23 (-) >0.05
rs11680009 chr2:29198118 FAM179A C - 13 A vs. G - - <1 (-) 19 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.