FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05
rs11151950 chr18:72053555 C18orf63 [+27133bp] C - 13 T vs. C 0.275 (T) 0.283 (T) <1 (-) 0 (-) <0.05
rs1974962 chr18:72062934 C18orf63 [+36512bp] C - 13 A vs. T 0.342 (T) 0.267 (T) >1 (-) 0 (-) <0.05
rs78399186 chr18:72053111 C18orf63 [+26689bp] C - 13 A vs. T 0.133 (T) 0.233 (T) <1 (-) 13 (-) <0.05
rs58369451 chr18:72061838 C18orf63 [+35416bp] C - 13 T vs. C 0.142 (T) 0.342 (T) >1 (-) 0 (-) <0.05
rs17807682 chr18:72056400 C18orf63 [+29978bp] C - 13 A vs. G 0.142 (G) 0.308 (G) <1 (-) 17 (-) <0.05
rs17234724 chr18:72073644 FAM69C [-29319bp] C - 3 A vs. G 0.025 (A) - <1 (-) 47 (-) <0.05
rs9955537 chr18:72076567 FAM69C [-26396bp] C - 12 T vs. C 0.233 (T) 0.35 (T) <1 (-) 38 (-) <0.05
rs4892205 chr18:72074817 FAM69C [-28146bp] C - 12 T vs. G 0.225 (G) 0.35 (G) >1 (-) 44 (-) <0.05
rs9319904 chr18:72077557 FAM69C [-25406bp] C - 12 T vs. C 0.242 (T) 0.292 (T) <1 (-) 37 (-) <0.05
rs138617387 chr18:72111433 FAM69C C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs117659255 chr18:72063924 C18orf63 [+37502bp] C - 12 T vs. C 0.033 (T) - >1 (-) 43 (-) <0.05
rs7239814 chr18:72121164 FAM69C C - 10 C vs. G - 0.167 (G) >1 (-) 0 (-) <0.05
rs17089188 chr18:72062398 C18orf63 [+35976bp] C - 13 T vs. G 0.467 (G) 0.483 (G) <1 (-) 19 (-) >0.05
rs2288262 chr18:72117246 FAM69C C - 9 T vs. G - 0.133 (T) <1 (-) 0 (-) >0.05
rs112657724 chr18:72083850 FAM69C [-19113bp] C - 4 A vs. G - - >1 (-) 47 (-) >0.05
rs113710329 chr18:72085340 FAM69C [-17623bp] C - 4 A vs. G 0.033 (A) - >1 (-) 47 (-) >0.05
rs145126645 chr18:72164033 CNDP2 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs76824432 chr18:72120901 FAM69C C - 9 T vs. G 0.008 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs79831081 chr18:72080772 FAM69C [-22191bp] C - 5 A vs. G 0.033 (A) - >1 (-) 25 (-) >0.05
rs1256726 chr18:72065966 FAM69C [-36997bp] C - 13 A vs. G 0.492 (A) 0.442 (A) <1 (-) 2 (-) >0.05
rs2346058 chr18:72129534 FAM69C [+4355bp] C - 13 A vs. G 0.467 (G) 0.442 (G) >1 (-) 0 (-) >0.05
rs4892222 chr18:72127126 FAM69C [+1947bp] C - 13 T vs. C 0.467 (C) 0.433 (C) >1 (-) 0 (-) >0.05
rs56315236 chr18:72128579 FAM69C [+3400bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs113255389 chr18:72081679 FAM69C [-21284bp] C - 5 A vs. G 0.033 (A) - >1 (-) 28 (-) >0.05
rs8097458 chr18:72081413 FAM69C [-21550bp] C - 5 T vs. C 0.033 (C) - <1 (-) 29 (-) >0.05
rs8097176 chr18:72081230 FAM69C [-21733bp] C - 5 T vs. G 0.033 (G) - <1 (-) 28 (-) >0.05
rs111772207 chr18:72079404 FAM69C [-23559bp] C - 5 T vs. C 0.025 (T) - >1 (-) 29 (-) >0.05
rs10163970 chr18:72079681 FAM69C [-23282bp] C - 5 T vs. C 0.033 (T) - >1 (-) 28 (-) >0.05
rs75408465 chr18:72090446 FAM69C [-12517bp] C - 4 T vs. C 0.033 (C) - <1 (-) 12 (-) >0.05
rs7240571 chr18:72142598 FAM69C [+17419bp] C - 13 T vs. C 0.3 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs9955357 chr18:72140107 FAM69C [+14928bp] C - 13 T vs. C 0.3 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs7240267 chr18:72142409 FAM69C [+17230bp] C - 13 T vs. C 0.317 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs11659496 chr18:72140194 FAM69C [+15015bp] C - 13 A vs. G 0.308 (G) 0.008 (G) >1 (-) 0 (-) >0.05
rs4892226 chr18:72134982 FAM69C [+9803bp] C - 13 T vs. C 0.308 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs1593482 chr18:72138771 FAM69C [+13592bp] C - 13 T vs. C 0.3 (T) 0.008 (T) <1 (-) 0 (-) >0.05
rs9959969 chr18:72132472 FAM69C [+7293bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12327095 chr18:72132871 FAM69C [+7692bp] C - 13 A vs. G 0.3 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs11662970 chr18:72126676 FAM69C [+1497bp] C - 13 A vs. G 0.483 (G) 0.167 (A) >1 (-) 0 (-) >0.05
rs4892212 chr18:72097218 FAM69C [-5745bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs746232 chr18:72110822 FAM69C C - 13 A vs. G 0.217 (G) 0.358 (G) <1 (-) 36 (-) >0.05
rs11873206 chr18:72083369 FAM69C [-19594bp] C - 5 T vs. C 0.033 (T) - >1 (-) 29 (-) >0.05
rs117485671 chr18:72115361 FAM69C C - 8 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs4892221 chr18:72126731 FAM69C [+1552bp] C - 13 A vs. C 0.325 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs9965729 chr18:72130431 FAM69C [+5252bp] C - 13 T vs. C 0.3 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs7235253 chr18:72127857 FAM69C [+2678bp] C - 13 A vs. C 0.3 (C) 0.017 (C) >1 (-) 10 (-) >0.05
rs12967839 chr18:72058707 C18orf63 [+32285bp] C - 13 A vs. G 0.208 (G) 0.267 (G) <1 (-) 10 (-) >0.05
rs4892224 chr18:72131182 FAM69C [+6003bp] C - 13 T vs. C 0.3 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs7233464 chr18:72111245 FAM69C C - 13 A vs. G 0.008 (A) 0.475 (A) >1 (-) 29 (-) >0.05
rs2162256 chr18:72122611 FAM69C C - 12 A vs. G 0.433 (A) 0.283 (G) <1 (-) 8 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.