FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115559861 chr18:72093151 FAM69C [-9812bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs17810098 chr18:72134476 FAM69C [+9297bp] C - 13 A vs. G 0.042 (A) 0.008 (A) <1 (-) 0 (-) >0.05
rs756011 chr18:72102013 FAM69C [-950bp] C - 12 A vs. C 0.358 (A) 0.267 (A) <1 (-) 45 (-) >0.05
rs35986561 chr18:72106879 FAM69C C - 13 T vs. C 0.375 (C) 0.133 (C) >1 (-) 43 (-) >0.05
rs28413692 chr18:72147609 CNDP2 [-15442bp] C - 13 T vs. C 0.383 (T) 0.317 (C) >1 (-) 0 (-) >0.05
rs17810134 chr18:72134639 FAM69C [+9460bp] C - 13 T vs. C 0.042 (T) - <1 (-) 0 (-) >0.05
rs80230832 chr18:72069314 FAM69C [-33649bp] C - 9 A vs. G 0.042 (A) - <1 (-) 71 (-) >0.05
rs17089200 chr18:72064002 C18orf63 [+37580bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs76583601 chr18:72058258 C18orf63 [+31836bp] C - 3 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs8083789 chr18:72123099 FAM69C C - 12 A vs. G 0.408 (A) 0.383 (A) <1 (-) 19 (-) >0.05
rs147355549 chr18:72162273 CNDP2 [-778bp] C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs17089196 chr18:72063956 C18orf63 [+37534bp] C - 13 T vs. G 0.067 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs72971792 chr18:72064801 FAM69C [-38162bp] C - 13 A vs. T 0.067 (T) - <1 (-) 0 (-) >0.05
rs143356347 chr18:72083481 FAM69C [-19482bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs12454720 chr18:72123370 FAM69C C - 12 T vs. G 0.425 (G) 0.392 (G) >1 (-) 16 (-) >0.05
rs72971795 chr18:72065112 FAM69C [-37851bp] C - 13 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs72971797 chr18:72065119 FAM69C [-37844bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs34028177 chr18:72168183 CNDP2 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs729605 chr18:72110541 FAM69C C - 13 A vs. G 0.092 (A) 0.158 (A) >1 (-) 4 (-) >0.05
rs11151953 chr18:72123860 FAM69C C - 13 C vs. G 0.417 (G) 0.392 (G) >1 (-) 0 (-) >0.05
rs7233212 chr18:72148333 CNDP2 [-14718bp] C - 13 T vs. C 0.383 (T) 0.317 (C) >1 (-) 0 (-) >0.05
rs7233812 chr18:72157210 CNDP2 [-5841bp] C - 13 A vs. G 0.275 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs72973804 chr18:72065669 FAM69C [-37294bp] C - 13 T vs. C 0.067 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs17089213 chr18:72066101 FAM69C [-36862bp] C - 13 T vs. C 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs4891553 chr18:72109863 FAM69C C - 13 T vs. C 0.092 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs80208705 chr18:72123952 FAM69C C - 12 T vs. C 0.075 (T) - <1 (-) 23 (-) >0.05
rs34144583 chr18:72100432 FAM69C [-2531bp] C - 13 A vs. G 0.375 (A) 0.242 (A) <1 (-) 42 (-) >0.05
rs149114417 chr18:72150062 CNDP2 [-12989bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs17808132 chr18:72065078 FAM69C [-37885bp] C - 8 A vs. C 0.042 (A) - <1 (-) 0 (-) >0.05
rs73971265 chr18:72174466 CNDP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2278154 chr18:72103782 FAM69C C - 13 T vs. C 0.358 (C) 0.292 (C) >1 (-) 43 (-) >0.05
rs72973803 chr18:72065542 FAM69C [-37421bp] C - 13 T vs. C 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs12967549 chr18:72063690 C18orf63 [+37268bp] C - 13 A vs. T 0.367 (A) 0.308 (A) >1 (-) 27 (-) >0.05
rs17089292 chr18:72105842 FAM69C C - 13 T vs. C 0.358 (C) 0.267 (C) >1 (-) 43 (-) >0.05
rs72973835 chr18:72076440 FAM69C [-26523bp] C - 12 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs7241762 chr18:72116373 FAM69C C - 13 T vs. C 0.458 (T) 0.133 (T) >1 (-) 29 (-) >0.05
rs76036829 chr18:72072200 FAM69C [-30763bp] C - 10 T vs. C 0.017 (T) 0.167 (T) <1 (-) 36 (-) >0.05
rs55730217 chr18:72076449 FAM69C [-26514bp] C - 12 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs1256717 chr18:72073952 FAM69C [-29011bp] C - 13 C vs. G 0.058 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs78535540 chr18:72072199 FAM69C [-30764bp] C - 10 T vs. G 0.017 (T) 0.167 (T) <1 (-) 36 (-) >0.05
rs1256718 chr18:72073913 FAM69C [-29050bp] C - 13 C vs. G 0.075 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs1262273 chr18:72073469 FAM69C [-29494bp] C - 12 A vs. G 0.017 (A) 0.25 (A) <1 (-) 24 (-) >0.05
rs72971769 chr18:72059371 C18orf63 [+32949bp] C - 13 A vs. G 0.075 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs72973808 chr18:72067349 FAM69C [-35614bp] C - 13 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs2241507 chr18:72102588 FAM69C [-375bp] C - 13 T vs. C 0.358 (T) 0.258 (T) <1 (-) 40 (-) >0.05
rs35903865 chr18:72076902 FAM69C [-26061bp] C - 12 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs2241506 chr18:72102660 FAM69C [-303bp] C - 13 A vs. G 0.342 (A) 0.275 (A) <1 (-) 41 (-) >0.05
rs1559805 chr18:72109174 FAM69C C - 13 A vs. C 0.4 (A) 0.3 (C) >1 (-) 8 (-) >0.05
rs6566807 chr18:72121451 FAM69C C - 13 A vs. G 0.292 (A) 0.017 (A) <1 (-) 6 (-) >0.05
rs141745353 chr18:72172397 CNDP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.