FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4892214 chr18:72109571 FAM69C C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12607579 chr18:72105632 FAM69C C - 13 A vs. T 0.358 (T) 0.275 (T) >1 (-) 42 (-) >0.05
rs756010 chr18:72102070 FAM69C [-893bp] C - 13 T vs. C 0.392 (C) 0.275 (T) <1 (-) 14 (-) >0.05
rs17089233 chr18:72070572 FAM69C [-32391bp] C - 13 T vs. C 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs1559806 chr18:72108787 FAM69C C - 13 A vs. G 0.4 (A) 0.3 (G) >1 (-) 10 (-) >0.05
rs890343 chr18:72102417 FAM69C [-546bp] C - 13 A vs. G 0.392 (A) 0.275 (G) >1 (-) 15 (-) >0.05
rs71359048 chr18:72092398 FAM69C [-10565bp] C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs72971776 chr18:72061756 C18orf63 [+35334bp] C - 13 A vs. C 0.075 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs78047264 chr18:72134230 FAM69C [+9051bp] C - 5 T vs. C 0.025 (C) - <1 (-) 39 (-) >0.05
rs72971775 chr18:72060832 C18orf63 [+34410bp] C - 13 A vs. C 0.075 (A) - >1 (-) 0 (-) >0.05
rs11660249 chr18:72096152 FAM69C [-6811bp] C - 13 A vs. G 0.133 (A) 0.292 (A) >1 (-) 41 (-) >0.05
rs117636962 chr18:72055358 C18orf63 [+28936bp] C - 11 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs1046406 chr18:72103197 FAM69C C - 13 T vs. C 0.392 (T) 0.308 (C) >1 (-) 16 (-) >0.05
rs17089247 chr18:72075994 FAM69C [-26969bp] C - 13 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs6566806 chr18:72121232 FAM69C C - 13 T vs. C 0.292 (T) 0.017 (T) <1 (-) 6 (-) >0.05
rs11662509 chr18:72073388 FAM69C [-29575bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs55994664 chr18:72054984 C18orf63 [+28562bp] C - 13 A vs. G 0.075 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs2278155 chr18:72103646 FAM69C C - 13 A vs. G 0.392 (A) 0.275 (G) >1 (-) 15 (-) >0.05
rs11873316 chr18:72083639 FAM69C [-19324bp] C - 13 A vs. G 0.183 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs72973816 chr18:72072035 FAM69C [-30928bp] C - 13 A vs. T 0.067 (A) - >1 (-) 0 (-) >0.05
rs11663522 chr18:72074647 FAM69C [-28316bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs17089171 chr18:72053760 C18orf63 [+27338bp] C - 13 T vs. C 0.075 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs56241410 chr18:72054957 C18orf63 [+28535bp] C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs55788331 chr18:72054540 C18orf63 [+28118bp] C - 13 A vs. G 0.075 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs55857454 chr18:72054507 C18orf63 [+28085bp] C - 13 T vs. C 0.075 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs11663476 chr18:72074491 FAM69C [-28472bp] C - 13 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs72973838 chr18:72076540 FAM69C [-26423bp] C - 13 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs72973831 chr18:72076078 FAM69C [-26885bp] C - 13 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs72973834 chr18:72076210 FAM69C [-26753bp] C - 13 A vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs11151951 chr18:72081736 FAM69C [-21227bp] C - 13 T vs. C 0.183 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs8093138 chr18:72075498 FAM69C [-27465bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs11663445 chr18:72074375 FAM69C [-28588bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs56275000 chr18:72074168 FAM69C [-28795bp] C - 13 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs1256716 chr18:72074477 FAM69C [-28486bp] C - 13 A vs. G 0.133 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs12606984 chr18:72104853 FAM69C C - 13 A vs. C 0.358 (A) 0.258 (A) <1 (-) 43 (-) >0.05
rs73472576 chr18:72124182 FAM69C C - 13 T vs. C 0.475 (C) 0.242 (T) <1 (-) 0 (-) >0.05
rs10445536 chr18:72083472 FAM69C [-19491bp] C - 13 C vs. G 0.183 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs890345 chr18:72082957 FAM69C [-20006bp] C - 13 C vs. G 0.192 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs12456995 chr18:72150143 CNDP2 [-12908bp] C - 13 A vs. G 0.275 (A) 0.008 (A) <1 (-) 0 (-) >0.05
rs1559804 chr18:72117258 FAM69C C - 12 T vs. C 0.383 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs890346 chr18:72082847 FAM69C [-20116bp] C - 13 C vs. G 0.183 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs72973829 chr18:72076021 FAM69C [-26942bp] C - 12 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs1017284 chr18:72081635 FAM69C [-21328bp] C - 13 A vs. G 0.183 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs17089353 chr18:72167869 CNDP2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs8093602 chr18:72075830 FAM69C [-27133bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs17089231 chr18:72070328 FAM69C [-32635bp] C - 13 T vs. C 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs2059579 chr18:72120670 FAM69C C - 13 A vs. G 0.267 (A) 0.017 (A) <1 (-) 7 (-) >0.05
rs72971747 chr18:72054282 C18orf63 [+27860bp] C - 13 C vs. G 0.15 (C) 0.067 (C) >1 (-) 24 (-) >0.05
rs77853526 chr18:72160080 CNDP2 [-2971bp] C - 12 A vs. G 0.083 (A) - <1 (-) 0 (-) >0.05
rs7230572 chr18:72156747 CNDP2 [-6304bp] C - 13 T vs. G 0.267 (T) 0.008 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.