FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs147011452 chr18:72069602 FAM69C [-33361bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11663601 chr18:72074756 FAM69C [-28207bp] C - 13 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs72971757 chr18:72055710 C18orf63 [+29288bp] C - 13 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs1465509 chr18:72063225 C18orf63 [+36803bp] C - 13 T vs. C 0.4 (T) 0.433 (T) <1 (-) 0 (-) >0.05
rs4892231 chr18:72167646 CNDP2 C - 13 A vs. G 0.267 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs140699832 chr18:72165197 CNDP2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs11876499 chr18:72093045 FAM69C [-9918bp] C - 13 T vs. C 0.2 (T) 0.317 (T) >1 (-) 24 (-) >0.05
rs55822239 chr18:72059758 C18orf63 [+33336bp] C - 13 A vs. G 0.075 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs4892210 chr18:72090089 FAM69C [-12874bp] C - 13 A vs. G 0.217 (A) 0.308 (A) >1 (-) 20 (-) >0.05
rs111836399 chr18:72076698 FAM69C [-26265bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs56377305 chr18:72056489 C18orf63 [+30067bp] C - 13 T vs. C 0.075 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs55685182 chr18:72056623 C18orf63 [+30201bp] C - 13 A vs. G 0.075 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs35366439 chr18:72076866 FAM69C [-26097bp] C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs9959340 chr18:72104182 FAM69C C - 13 A vs. G 0.425 (A) 0.275 (G) >1 (-) 12 (-) >0.05
rs139927962 chr18:72136263 FAM69C [+11084bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs11664042 chr18:72057288 C18orf63 [+30866bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11872182 chr18:72055667 C18orf63 [+29245bp] C - 13 T vs. C 0.075 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2346057 chr18:72118990 FAM69C C - 13 C vs. G 0.267 (G) 0.017 (G) >1 (-) 5 (-) >0.05
rs11664169 chr18:72057612 C18orf63 [+31190bp] C - 13 A vs. G 0.075 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs56117116 chr18:72056796 C18orf63 [+30374bp] C - 13 C vs. G 0.075 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs34344052 chr18:72076918 FAM69C [-26045bp] C - 10 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs72973840 chr18:72076746 FAM69C [-26217bp] C - 13 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs9963944 chr18:72093164 FAM69C [-9799bp] C - 13 T vs. C 0.192 (C) 0.325 (C) <1 (-) 20 (-) >0.05
rs10871735 chr18:72123909 FAM69C C - 13 C vs. G 0.383 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs4892211 chr18:72090116 FAM69C [-12847bp] C - 13 A vs. G 0.225 (A) 0.325 (A) >1 (-) 20 (-) >0.05
rs11664265 chr18:72115808 FAM69C C - 13 T vs. C 0.092 (T) 0.483 (T) >1 (-) 11 (-) >0.05
rs76397326 chr18:72144542 CNDP2 [-18509bp] C - 13 A vs. T 0.025 (A) - >1 (-) 9 (-) >0.05
rs7233849 chr18:72111192 FAM69C C - 13 A vs. G 0.492 (G) 0.225 (A) <1 (-) 39 (-) >0.05
rs4892207 chr18:72079120 FAM69C [-23843bp] C - 13 A vs. C 0.217 (C) 0.408 (C) <1 (-) 19 (-) >0.05
rs6566810 chr18:72163459 CNDP2 C - 13 A vs. T 0.258 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs12606271 chr18:72086060 FAM69C [-16903bp] C - 13 A vs. G 0.183 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs1365253 chr18:72090297 FAM69C [-12666bp] C - 13 A vs. G 0.217 (G) 0.325 (G) <1 (-) 20 (-) >0.05
rs11660298 chr18:72053210 C18orf63 [+26788bp] C - 13 T vs. C 0.075 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs4581796 chr18:72094413 FAM69C [-8550bp] C - 13 T vs. C 0.217 (C) 0.317 (C) <1 (-) 21 (-) >0.05
rs9967474 chr18:72094311 FAM69C [-8652bp] C - 13 A vs. G 0.217 (A) 0.325 (A) >1 (-) 21 (-) >0.05
rs17089172 chr18:72055187 C18orf63 [+28765bp] C - 13 C vs. G 0.075 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs6566803 chr18:72094135 FAM69C [-8828bp] C - 13 T vs. C 0.217 (C) 0.317 (C) <1 (-) 22 (-) >0.05
rs4892215 chr18:72115877 FAM69C C - 13 T vs. C 0.092 (C) 0.483 (C) <1 (-) 13 (-) >0.05
rs10514133 chr18:72115844 FAM69C C - 13 T vs. C 0.092 (C) 0.483 (C) <1 (-) 13 (-) >0.05
rs59942676 chr18:72093659 FAM69C [-9304bp] C - 13 A vs. C 0.183 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs149694131 chr18:72123652 FAM69C C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs10514132 chr18:72115547 FAM69C C - 13 A vs. G 0.092 (A) 0.45 (A) >1 (-) 13 (-) >0.05
rs11873690 chr18:72159754 CNDP2 [-3297bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs73474671 chr18:72158783 CNDP2 [-4268bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs60487328 chr18:72158621 CNDP2 [-4430bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs61656663 chr18:72160690 CNDP2 [-2361bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10871734 chr18:72091451 FAM69C [-11512bp] C - 13 A vs. G 0.217 (A) 0.317 (A) >1 (-) 20 (-) >0.05
rs12957244 chr18:72086601 FAM69C [-16362bp] C - 13 A vs. C 0.217 (C) 0.333 (C) <1 (-) 19 (-) >0.05
rs11873741 chr18:72159831 CNDP2 [-3220bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1365254 chr18:72087303 FAM69C [-15660bp] C - 13 A vs. G 0.217 (A) 0.308 (A) >1 (-) 20 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.