FAM69C, chr18:72102963-72125179 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12458623 chr18:72059039 C18orf63 [+32617bp] C - 13 A vs. G 0.1 (A) 0.242 (A) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1256719 chr18:72073329 FAM69C [-29634bp] C - 13 T vs. C 0.217 (T) 0.05 (T) >1 (-) 25 (-) >0.05
rs11661135 chr18:72115737 FAM69C C - 13 T vs. C 0.092 (C) 0.483 (C) <1 (-) 14 (-) >0.05
rs72973860 chr18:72077838 FAM69C [-25125bp] C - 7 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs17234081 chr18:72059171 C18orf63 [+32749bp] C - 13 C vs. G 0.292 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs752773 chr18:72112287 FAM69C C - 13 C vs. G 0.5 (C) 0.225 (G) >1 (-) 37 (-) >0.05
rs2881299 chr18:72162147 CNDP2 [-904bp] C - 13 T vs. G 0.267 (G) 0.017 (G) >1 (-) 0 (-) >0.05
rs7229183 chr18:72068718 FAM69C [-34245bp] C - 12 C vs. G 0.008 (G) 0.117 (G) >1 (-) 24 (-) >0.05
rs79718852 chr18:72069920 FAM69C [-33043bp] C - 12 A vs. G 0.017 (A) 0.108 (A) <1 (-) 25 (-) >0.05
rs78044276 chr18:72170142 CNDP2 C - 13 T vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs4892230 chr18:72155572 CNDP2 [-7479bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11553061 chr18:72057474 C18orf63 [+31052bp] C - 13 A vs. G 0.292 (G) 0.042 (G) <1 (-) 0 (-) >0.05
rs76827382 chr18:72071804 FAM69C [-31159bp] C - 12 A vs. G - 0.158 (A) <1 (-) 26 (-) >0.05
rs34694369 chr18:72077040 FAM69C [-25923bp] C - 12 T vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs9966498 chr18:72099323 FAM69C [-3640bp] C - 13 A vs. G 0.342 (A) 0.375 (A) <1 (-) 43 (-) >0.05
rs4892216 chr18:72115906 FAM69C C - 13 A vs. G 0.092 (G) 0.483 (G) <1 (-) 15 (-) >0.05
rs75983113 chr18:72071525 FAM69C [-31438bp] C - 12 T vs. C - - >1 (-) 25 (-) >0.05
rs12968560 chr18:72088998 FAM69C [-13965bp] C - 13 A vs. G 0.217 (A) 0.308 (A) >1 (-) 19 (-) >0.05
rs12961069 chr18:72127506 FAM69C [+2327bp] C - 13 T vs. C 0.15 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs57238103 chr18:72064033 C18orf63 [+37611bp] C - 13 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs112708086 chr18:72070916 FAM69C [-32047bp] C - 12 T vs. C - - <1 (-) 25 (-) >0.05
rs11664136 chr18:72057750 C18orf63 [+31328bp] C - 13 A vs. G 0.292 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs4892223 chr18:72128424 FAM69C [+3245bp] C - 13 A vs. G 0.15 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs74859684 chr18:72070653 FAM69C [-32310bp] C - 12 A vs. T 0.017 (T) 0.125 (T) >1 (-) 25 (-) >0.05
rs72973853 chr18:72077457 FAM69C [-25506bp] C - 12 A vs. C 0.067 (A) - >1 (-) 0 (-) >0.05
rs73470570 chr18:72073738 FAM69C [-29225bp] C - 10 T vs. C 0.142 (C) 0.142 (C) <1 (-) 0 (-) >0.05
rs72973855 chr18:72077598 FAM69C [-25365bp] C - 12 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs17807844 chr18:72058217 C18orf63 [+31795bp] C - 13 T vs. C 0.292 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs75764536 chr18:72077615 FAM69C [-25348bp] C - 12 A vs. G 0.067 (A) - >1 (-) 0 (-) >0.05
rs56324673 chr18:72061652 C18orf63 [+35230bp] C - 13 A vs. G 0.283 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs72971774 chr18:72060117 C18orf63 [+33695bp] C - 13 A vs. G 0.292 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs80022006 chr18:72054467 C18orf63 [+28045bp] C - 13 T vs. G 0.058 (G) 0.05 (G) <1 (-) 42 (-) >0.05
rs72973858 chr18:72077772 FAM69C [-25191bp] C - 12 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs72971768 chr18:72059056 C18orf63 [+32634bp] C - 13 A vs. G 0.292 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs62618698 chr18:72057517 C18orf63 [+31095bp] C - 13 A vs. G - - <1 (-) 6 (-) >0.05
rs117075496 chr18:72060433 C18orf63 [+34011bp] C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs8092532 chr18:72059510 C18orf63 [+33088bp] C - 13 A vs. G 0.292 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs9965577 chr18:72116361 FAM69C C - 13 A vs. G 0.092 (A) 0.483 (A) >1 (-) 10 (-) >0.05
rs118075674 chr18:72124553 FAM69C C - 13 T vs. C 0.083 (T) - >1 (-) 8 (-) >0.05
rs1365249 chr18:72164097 CNDP2 C - 13 A vs. G 0.325 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs4892229 chr18:72155456 CNDP2 [-7595bp] C - 13 A vs. G 0.267 (G) - <1 (-) 0 (-) >0.05
rs80059537 chr18:72068923 FAM69C [-34040bp] C - 12 A vs. G 0.017 (A) 0.125 (A) <1 (-) 33 (-) >0.05
rs3764509 chr18:72167124 CNDP2 C - 13 C vs. G 0.192 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs35091856 chr18:72077016 FAM69C [-25947bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs17807838 chr18:72058093 C18orf63 [+31671bp] C - 13 A vs. G 0.158 (G) - >1 (-) 5 (-) >0.05
rs150149863 chr18:72069769 FAM69C [-33194bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs7241278 chr18:72160607 CNDP2 [-2444bp] C - 13 C vs. G 0.3 (G) 0.292 (G) <1 (-) 3 (-) >0.05
rs6566809 chr18:72149395 CNDP2 [-13656bp] C - 13 T vs. C 0.425 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs11661821 chr18:72073056 FAM69C [-29907bp] C - 13 A vs. G 0.083 (A) 0.183 (A) >1 (-) 16 (-) >0.05
rs146693882 chr18:72115500 FAM69C C - 8 T vs. C - - >1 (-) 30 (-) >0.05
rs1365256 chr18:72078264 FAM69C [-24699bp] C - 6 T vs. C 0.05 (T) 0.008 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.